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Information for unigene UN09922

FASTA Sequence
Unigene ID: UN09922Length: 1042  SNP
GGAGTGGATAACGAAGATTTACTTCATGTTTGGCAGAAGTTATTACATGCAAGTTTGCGCATTTATACACCAAGTGCGCATCAAAG
CTAGAGTAACAAATAGCTAGACCTATATATAGTATTCTTTAACCGAGGCAAACCGTATGGTTCTTGGTGATGGAACTCCGAGAATC
TTGGAGGGAGAAGTTGGAATTGATGTCAGGAAGATGCATTGCAGAGTCCATAGAGGAAGACGAAGGAAACTGATCCTCGAACCATT
GGATTGTGAGGGGTGATGTGTTGTTGCAAATAGTGTTTGGGGCGAAAAAGAGAGTAGAGTAGTCTTTGGTAAGGCTTGCTTCTTGT
GTTTCACATGCTTTCACTAGCATGCTCTCCATGTATTTCCCTTGTGCTTCTATCCTTTGATTCACCTGTCTTTCTACCTCTACATC
TTCCTCTATTCTTCTTTGCACTTCAGTTTGCATCTCGTTCATATTGTGACCAATGATGTGTGGAGTAGTGAATACAACATTCCTCT
GAAGATCCAACATGGAAACTCTATTAGTATCCCTAATATTAATGGAGTGACCATGACTATGGTCCTTGTGAGGTTGCTTTCCAAGT
CTGGAGATGGCTCTTGAGATGGTAAAGTGTAAGACCTTTCACGCCCATCACTCTCATTATCGTCTTCGGTGTAGCCTTGTCAGGGC
CTCCAAGGTGAGTAACGGCGTCAACGAAGCGTTCATGAAGCTCAGCAGTCCAGCGAAGGCGAGGCTTAGGATCGGTGGTGAGGACT
AGACCTGGTGGGGACTCAGATCTCCTCTCATCCCTTGATTGCATCATGATTTAACTAACAAATGCAATATTCAGGACAAGCGAATA
TTAGTATTTATGAAAGATATGGGATAGGAAAAAAGAACACACGACGTCTTTGCAAATTATAAAGTTTGATTCTGGACTGGCACTAA
CACATAAAACTTTTTGATATTAAAAAAAAAAAATTAATAAAAGCAGACAAGCATATATCTATAGACTATATTATGCAATAGGGTTC
TAGGCTTTCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884923 myb family transcription factor [Arabidopsis lyrata subsp. lyrata]6553e-066
NP_187879 myb family transcription factor [Arabidopsis thaliana]6491e-065
BAB02417 unnamed protein product [Arabidopsis thaliana]6042e-060
XP_002453376 hypothetical protein SORBIDRAFT_04g004930 [Sorghum bicolor]3103e-026
ACJ85303 unknown [Medicago truncatula]3085e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q9SAK5 Myb family transcription factor APL3002e-026
Q700D9 Putative Myb family transcription factor At1g146001845e-013
Q9FGT7 Two-component response regulator ARR181371e-007
Q9ZWJ9 Two-component response regulator ARR21362e-007
Q9LZJ8 Putative two-component response regulator ARR201353e-007

TrEMBL top hits (Blast detail)Scoree value
Q8VYI2 AT3g12730/MBK21_96491e-065
Q9LTW1 Similarity to transfactor6042e-060
C5XW63 Putative uncharacterized protein Sb04g0049303102e-026
B7FKL9 Putative uncharacterized protein3083e-026
B9HI32 Predicted protein3074e-026

Arabidopsis top hits (Blast detail)Scoree value
AT3G12730.1 myb family transcription factor6504e-068
AT1G79430.2 APL (ALTERED PHLOEM DEVELOPMENT); transcription factor/ transcription regulator3002e-027
AT4G13640.1 UNE16 (unfertilized embryo sac 16); transcription factor2956e-027
AT4G13640.2 UNE16 (unfertilized embryo sac 16); transcription factor2956e-027
AT3G24120.1 myb family transcription factor2948e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  22%
 
123  33%
 
84  44%

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