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Information for unigene UN09945

FASTA Sequence
Unigene ID: UN09945Length: 479 SSR 
GAATGCAAGAAACTTAATACTCCACAAAATTAAAACAAGTGTCTAATACTGATCTAGAGCAGTAACTTTAGGGTGTTTCAAGCAAT
GAAACCGATGATCACTTGACAAAGTAGAGCTTGCCCATGTCATGAAGGACAGCGACAAAGGCAATGAAACCGATGCTCATGACAAG
GACGACATTAGGGGAGATCTTGAGACCGGGTGCGTCATCCGTGTAGAACTGAAGCATGGATCCTGCTGCACCACCAGAGGCTCCTC
CTCCTCCTCCACTTCCACTAGGCTTCCTCCTACGCATGCTAGCAGCTGCAGCTGCACTTCCTCTCTGTGGAGCTCCACTTCCCACC
ATCCCTTCTTTAATTCACAGATTTGGCTTTAGAGATTCTGATGTCGACGAGAACGATAACAAGACGAAGAGATGTTCGGACCTTTT
GTGTTGGAGTTGACCGGCCTCTTGATTTTTTTATAACAAGGGTTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182033 protein transport protein sec61 subunit beta [Arabidopsis thaliana]3794e-035
XP_002881995 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3794e-035
NP_191613 Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]3212e-028
BAC42429 putative transport protein subunit [Arabidopsis thaliana]3184e-028
XP_002878341 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3184e-028

Swiss-Prot top hits (Blast detail)Scoree value
P38389 Protein transport protein Sec61 subunit beta3793e-036
O43002 Protein transport protein sec61 subunit beta1445e-009
P60467 Protein transport protein Sec61 subunit beta1429e-009
P60468 Protein transport protein Sec61 subunit beta1429e-009
Q9CQS8 Protein transport protein Sec61 subunit beta1429e-009

TrEMBL top hits (Blast detail)Scoree value
B9DGF7 AT2G45070 protein3792e-035
Q9M206 Transport protein subunit-like3211e-028
Q8GY93 Putative transport protein subunit3183e-028
C6T1E8 Putative uncharacterized protein3041e-026
A9P911 Predicted protein3013e-026

Arabidopsis top hits (Blast detail)Scoree value
AT2G45070.1 SEC61 BETA; protein transporter3802e-037
AT2G45070.2 SEC61 BETA; protein transporter3802e-037
AT2G45070.3 SEC61 BETA; protein transporter3802e-037
AT2G45070.4 SEC61 BETA; protein transporter3802e-037
AT3G60540.1 sec61beta family protein3363e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  50%
 
122  50%

Unigene MembersMember information