 |
Information for unigene UN09966
| FASTA Sequence |
| Unigene ID: UN09966 | Length: 797 |
| SNP | AAAAAACGTAATAATCTTTATATAAATTTTATTGTCTGTTGTGGACATGTACATAAAACATTTTGTCATAAAATTTTGAAGCTATT
AGTTTTATCAAAAAAAATTTTTTGAAGCTATTAGCCGATTATCGATATTGTTCCCCACCGATCTAACCTCTTTTGTATTTTTTTTT
TTTTGTATTTTATCTTCCTTACGACTTACTTATTTATTTTTCCCTGGACATATATAATAATTAACGTTATGTAATTTCAATAACAT
TCAGGACTTTGGTACTTAAAGCGATCAGTGCAATAGTCATAGTTCATGTACTTATTTCTGAAATGCTCATAAATTTTCTGTTCGTA
TCCCCTTAGCCTTTGATATTTGCCTCCATTCCACCAATAGTTGGAAAATCCACAAGTGGCAACGTTATCACTCCGACCATCTACGT
AGCAGCCTGAGAGGCCGGAAAAGTCTTGGAAATGGGCGATGAAAGGAGAAAATGCATAGTTAATCTTGGTCCGACCGCCATCAGTC
GCCCAAGAGTCACCGTTCCAGAGACTGGCTTCTACTTTCATCGGCTTTGATGGATAGTTAACACCTTTCTCGTTCTTGTACACTCT
TATTGGGACGTTGTCAACGTAAAACACAATTTGGTAAGGGTTCCAAAGAATCCCATAAGTGTGGTAATGTTTGATGGGGTTAAACC
AAAGCAAGAACCTGTTCTCTGTTTCCTTCTCCATTCGCAAAGATATTTGTCTGTAACGTTATTGGTTTTCCATCGTAGTTGCCTAA
GAACTCGAAGTCAATCTCATCGC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883570 hypothetical protein ARALYDRAFT_899104 [Arabidopsis lyrata subsp. lyrata] | 712 | 5e-073 |
| NP_189141 xyloglucan endotransglucosylase/hydrolase protein 3 [Arabidopsis thaliana] | 710 | 8e-073 |
| ABK28571 unknown [Arabidopsis thaliana] | 710 | 8e-073 |
| XP_002863781 predicted protein [Arabidopsis lyrata subsp. lyrata] | 665 | 1e-067 |
| XP_002961421 hypothetical protein SELMODRAFT_403283 [Selaginella moellendorffii] | 312 | 1e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJR7 Xyloglucan endotransglucosylase/hydrolase protein 3 | 710 | 4e-074 |
| Q9SV60 Xyloglucan endotransglucosylase/hydrolase protein 2 | 512 | 3e-051 |
| Q9SV61 Putative xyloglucan endotransglucosylase/hydrolase protein 1 | 493 | 5e-049 |
| Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 7 | 358 | 2e-033 |
| Q6YDN9 Xyloglucan endotransglucosylase/hydrolase | 353 | 9e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEY2 Putative uncharacterized protein (Fragment) | 710 | 5e-073 |
| C6TJL7 Putative uncharacterized protein | 298 | 3e-025 |
| A9PG67 Putative uncharacterized protein | 274 | 2e-022 |
| Q6IWH9 Putative xyloglucan endotransglycosylase (Fragment) | 272 | 3e-022 |
| C5G5Y5 Xyloglucan endotraglucosylase/hydrolase | 264 | 3e-021 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25050.1 XTH3 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 711 | 3e-075 |
| AT4G13090.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 512 | 3e-052 |
| AT4G13080.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 493 | 5e-050 |
| AT4G37800.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 358 | 2e-034 |
| AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 349 | 2e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
