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Information for unigene UN09975
| FASTA Sequence |
| Unigene ID: UN09975 | Length: 1352 |
| SNP | GGGTCCTTCTTTCATCTGCTGTTACAAACCTTAACTTTGATCCTGTCTGGTCACCATGGCTTCAGCTACTTTCTCTGTCCCCAAAC
CATCTCTTCAGGGTTTCACTGACTTCTCAGGATTGAGAAGCTCCTCTGCTTCACTTCCCTTCGGCAAGAAACTTTCTTCCGATGAG
TTTGTTTCCGCTGTCTCTTTCCAGACTTCTGCAATGGGAAGCAGTGGTGGATACAGGAAAGGTGTCACCGAGGCTAAACTTAAGGT
GGCCATCAACGGATTCGGTAGGATAGGGAGGAACTTCTTGAGATGCTGGCATGGCCGTAAGGACTCTCCTTTTGATGTCATTGCCA
TTAACGACACCGGCGGTGTCAAGCAGGCTTCTCATCTCCTTAAGTACGACTCAACTCTCGGAATCTTCGACGCTGACGTGAAACCT
TCCGGAGACGCTGCCCTCTCTGTAGATGGAAAGATCATCAAGGTTGTGTCTAACCGCAACCCGTCTCTTCTCCCCTGGAAGGAGTT
AGGAATCGACATTGTCATTGAAGGAACGGGAGTGTTTGTGGACAGAGAAGGTGCAGGGAAACACATTGAAGCTGGAGCTAAGAAGG
TTATCATTACTGCTCCAGGCAAAGGAGACATCCCAACTTACGTTGTTGGTGTCAATGCTGATGCTTACAACCCCGACGAGCCGATC
ATCAGCAATGCATCTTGCACTACTAACTGTCTTGCTCCCTTCGTCAAAGTTCTTGACCAGAAGTTTGGTATCATAAAGGGTACAAT
GACAACTACTCACTCCTACACCGGTGATCAGAGGTTACTAGACGCTAGCCACCGTGACCTAAGGAGAGCAAGAGCAGCTGCTTTAA
ACATTGTTCCCACATCCACAGGAGCAGCTAAAGCAGTGGCTCTCGTGCTCCCTAACCTCAAAGGAAAACTCAACGGAATCGCTCTC
CGTGTACCGACACCGAACGTGTCAGTGGTTGATCTCGTTGTGCAGGTGACCAAGAAGACTTTCGCTGAGGAAGTTAACGCTGCTTT
CAGAGACTCCGCAGAGAAAGAGCTTAAAGGTATACTCGAAGTCTGTGATGAGCCGCTTGTGTCAGTTGATTTCAGATGCTCAGATG
TGTCGTCCACCATTGATTCTTCACTCACTATGGTGATGGGAGATGATATGGTTAAGGTGATTGCTTGGTATGATAATGAATGGGGT
TACTCACAGAGAGTTGTTGATTTGGCTGACATTGTTGCCAACAACTGGAAGTGATTTGTATCTACTTTTCAAATCAAAACTCTTTA
TAATTAACAGGTCTCAAAAACAACAAATAATGATAATAATATACAGAGATGTAATGTTATAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34149 unnamed protein product [Thellungiella halophila] | 1992 | 4e-221 |
| NP_566796 glyceraldehyde-3-phosphate dehydrogenase A [Arabidopsis thaliana] | 1931 | 5e-214 |
| XP_002875330 gapa [Arabidopsis lyrata subsp. lyrata] | 1931 | 5e-214 |
| AAA32793 glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana] | 1928 | 1e-213 |
| XP_002892719 GAPA-2 [Arabidopsis lyrata subsp. lyrata] | 1888 | 5e-209 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25856 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1931 | 2e-215 |
| P12858 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1759 | 2e-195 |
| P09315 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1743 | 1e-193 |
| P19866 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic | 1691 | 1e-187 |
| P09043 Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) | 1683 | 1e-186 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LPW0 At1g12900 | 1874 | 1e-207 |
| A9PI59 Putative uncharacterized protein | 1836 | 3e-203 |
| A9PK22 Putative uncharacterized protein | 1836 | 3e-203 |
| B9IA33 Predicted protein | 1835 | 4e-203 |
| A9PIN0 Putative uncharacterized protein | 1833 | 7e-203 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G26650.1 GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase/ protein binding | 1932 | 1e-216 |
| AT1G12900.1 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1880 | 1e-210 |
| AT1G12900.3 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1694 | 5e-189 |
| AT1G42970.1 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase | 1404 | 2e-155 |
| AT1G12900.2 GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase | 1211 | 5e-133 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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