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Information for unigene UN09978

FASTA Sequence
Unigene ID: UN09978Length: 538 SSR 
GGGATCGTGGGGTTCATCTTTGTAGTCGCCTTCGAATTCGCAGAGAGAGAGAGAGAGAGAGGAAGAATGAAGGTGAGATCATCTGT
GAAGAAGTTGTGTGAGTTTTGTAAGACGGTGAAGCGCCGTCGACGTGTCTATGTTATTTGTTCGTCCAATCCTAAGCACAAGCAAA
GGCAGGGATTCTGCTCCATTGCTCATGATGGAGTCATTCCTCCTCCCTTGTTTTCGGAGTCGGTTGCTAATCAGGAGGTGGTGAGG
ATGCCTGGCCAGGGAGTATCAGCTGGTCTCGCATCGCTCTTACACAAAAGGCCTGAGCCAGCAGCGGTTTTCGGATGGAGGTCAGG
TCTTGCATCCGTTCTCTTCAAGCAAGGGAATTAGCAAAGTTAAAACCAGCATTTAATCTATTTGGATTTTCCCAAGTTGTAATCCA
AAGTTTGGTTCTCAACACATTTACTTTGGTCAGTTGTAGGCTCTTCTAGACCCCGTTTGATTTGCTTGCACCTTATATGACTTGAA
TAAAGATATAATATTAAACTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871926 ribosomal protein L36 family protein [Arabidopsis lyrata subsp. lyrata]4577e-044
NP_197518 Ribosomal protein L36 [Arabidopsis thaliana]4551e-043
3BBO Chain 6, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome4433e-042
XP_002285234 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]3171e-027
CAN71764 hypothetical protein VITISV_039227 [Vitis vinifera]3116e-027

Swiss-Prot top hits (Blast detail)Scoree value
A5VLI2 50S ribosomal protein L361582e-010
B2G8V5 50S ribosomal protein L361582e-010
Q035A6 50S ribosomal protein L361572e-010
B3WAJ5 50S ribosomal protein L361572e-010
Q03PY0 50S ribosomal protein L361545e-010

TrEMBL top hits (Blast detail)Scoree value
Q8W464 Ribosomal protein L364558e-044
A5AX15 Ribosomal protein L363114e-027
A9P840 Ribosomal protein L362891e-024
B9IMZ0 Ribosomal protein L362891e-024
B9HAK1 Ribosomal protein L362773e-023

Arabidopsis top hits (Blast detail)Scoree value
AT5G20180.1 ribosomal protein L36 family protein4565e-046
AT5G20180.2 ribosomal protein L36 family protein4565e-046
ATCG00760.1 encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex1358e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  57%
 
123  43%

Unigene MembersMember information