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Information for unigene UN09979
| FASTA Sequence |
| Unigene ID: UN09979 | Length: 1841 |
SSR | | GGATTAATTTACTTTATTTTTTGGCATAATGCTAAGTTTTGGATACAGTGAACTCTGTGCTATTCTGAGTAGATTGTCATTGCCTG
TGATAACAGAACAATAAGGTTTGTTGAATTCAAGCCAATCTTGGCTTTGGGTTGAGCTCTATGTCAACACTTGTAGGTGTCTTTGG
GGTTGAAGCAACGGCGCCAAACTTGCGGACCAGGATTTTGAAACATGGCATCAACACAACGTATAGCGCAATGAAGAAAAATGGAG
TTGCCACGAGCCACCCTAGTAACGCATTACCAATGCTTAAAAAGACATCCTGCGAGGCTTGGCCAGTGAAAACCTTCTTAAGGGCA
TCTGACGTCAAAGGAGAATGAGGACCACCGGTGACATTTTCACCGAGTCGTAGGAAAGGCACCACCAGAGCTATTTCTACAGGAGT
GGCAATAATGTTAGACAACATGACGGTTGGAGCATGACAAGCAGATCCAAAAAATGCAATAGCTACTCCACAAAGAAACACAGGAA
CACACAGCAGAAGGAAAATAAATATCTGAATAAGCATTTGTCTGTACTCTCCATTCTTCTCAAGCTCTCCACTCTGTGTCTTCACA
ACTTCTTTCTTCAACATTTGAACGACCTCATTAATATTGTGATGAGTAATCAAATCAAGAGCAATGTCAAGTGTCATCCTGCGAAT
ATCAAGGTTCGGGCTTGAGAGTACTCTGAGCACATCTATTATTAGCTCAACCATGATATCTCTGTGCGATGACTTAAGCTCACTCA
ACCGATCGAGCAAAATAAGCTTCACATTGTTGTCACTCTGAGAAAGAAGAAGTTGACAGTAGGTGTTGGCAGCAGCCCTAATAGCA
GTAGGGGCAGATGAGAGAGAAACAAGCGTCCCAGCACATTCATAGATAACTGCAGAGGAAGTGGCACTCAACAGAGAAATAATAAT
CTTAATATATTTCCCCTTCTCTGATGGTTTAGTCTTGCACACACTTCGAATCAGCTCCAGCACCACCATCTGAAGCGATTCATTCC
AGTCTGAAACCTTGTCAACATTGCTCAGAAGATAATTCACAGCTCGTTCCTCAGCACAAGTAAAAAGCATCAGAAACGCATTTCTC
TTGGCAGACGGATCTTGTTCTGTTGACAAAGCTTTCTCGATCATTTCAGGTGCATCCACAAAGAGCTGCTCGCCATTTGGAAGCTT
ATAGATCGACATGACGGCCAGAATTGCATTCCTACGAACAAACGGATGACGGTGCTCCAGATTCTGCAACACTGATGGAGTCAAAG
GCTCCACGATCTCAGTCTCCTTCAACCGGCAGAGAAACCTCAGCGCCACTCCACGAATGTACTCATTAGGATGCATAAGGTTGTTC
CGGAGATTCTGACAAATCAAAATCATTTCAGGAAGTACCTTCCCTCTGGAATCTGTTTTCTCAATCAGCTCCAGGTACAGCAGCAG
AAGCTTTTGGATCGTGTGGTCCTCAGAAGGCAGCACGTATCGAATAATAGTTATGAAAAGCTGAGGAATGGTTTCGCCGTTCAGCA
TAAGCATAACCGCTTTCTTCATGGCGTCAACTTTTGCTTCCACATCGTTTCCTTCTAGAGCTTCTTTAATCTCCTTGGCCACTGCT
GGAGTCCCTTTGTCATAGTGTACGAGCAAGGTACTAGATTTGTCCATCTTTTATAGAGCGCTCAATGTACGAGATCCAGAGAGAGA
GAGAGAGAGGAGCAGATCTACGGAGTTGCAAAGCTTTGGATCCCAGAGAGATTTTGGATCTCGCGAAACGAACACTCACGCAGAAT
CGAGTGAGATGAATATGTACTTTGTGATATGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB45907 putative protein [Arabidopsis thaliana] | 1823 | 2e-201 |
| NP_194877 coatomer subunit beta-2 [Arabidopsis thaliana] | 1822 | 3e-201 |
| CAB45908 Beta-COP-like protein [Arabidopsis thaliana] | 1822 | 3e-201 |
| NP_194876 coatomer subunit beta-1 [Arabidopsis thaliana] | 1818 | 9e-201 |
| XP_002869324 coatomer subunit beta-1 [Arabidopsis lyrata subsp. lyrata] | 1817 | 1e-200 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SV20 Coatomer subunit beta-2 | 1822 | 1e-202 |
| Q9SV21 Coatomer subunit beta-1 | 1818 | 4e-202 |
| Q0JNK5 Coatomer subunit beta-2 | 1426 | 1e-156 |
| Q53PC7 Coatomer subunit beta-1 | 1398 | 2e-153 |
| Q23924 Coatomer subunit beta | 1059 | 4e-114 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5AHP0 Putative uncharacterized protein | 1635 | 1e-179 |
| B9ILF4 Predicted protein | 1628 | 7e-179 |
| B9N680 Predicted protein | 1589 | 2e-174 |
| B9N683 Predicted protein | 1589 | 2e-174 |
| C0PR52 Putative uncharacterized protein | 1573 | 2e-172 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G31480.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 1823 | 8e-204 |
| AT4G31490.1 coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putative | 1822 | 1e-203 |
| AT4G10140.1 unknown protein | 591 | 6e-061 |
| AT1G33490.1 unknown protein | 503 | 1e-050 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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