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Information for unigene UN10003

FASTA Sequence
Unigene ID: UN10003Length: 924 SSR 
GGACCACACCACCATATAATATCAAAGATCCAACATGGCAACTCCCCAAGATAAACTTTCCTCCAAATCTTTTAAGTGGTTTTCCA
CCAAAGCCCTAAAACTAAACCTAGGTTTCCAAAACCGACGAGGTTCATCACCAAAATCCAATTCTTCTTCAAGCTTAAACTCTCCA
AGAAGCAACACCGACGACAACAACAGCAACATAAAAAGTCGCCACTCCCATGACGAGCTCCGTCGAGTCTTCAGCCACTTCGACGT
TAACAGCGACGGTAAGATCTCAGCCTTTGAGCTCAGAGACTACTTCGGATCCGTAGGTGAGTATATAACTCACGAGGCAGCTCAAG
AGGCGATAAACGAAGTCGATACTGACGCTGATGGATCTTTAGGGTTTGAGGATTTTGTTGGATTGATGACGAGAAGAGATCTTGAC
GCTAATGGTGACGGCGGCCGAGAATTGAAGACGGCGTTTGAGATGTTTGAGGTGGAGAAAGGGTCAGGATGCATAACACCAAAGGG
TTTGCAAAATATGCTTACGAAGTTAGGGGAATCAAGAACGTATGGAGAGTGTGAAGCAATGATAAATTATTACGATATTGATGGTA
ATGGAGTTCTTGATTATCATGAGTTTCGGCAAATGATGACCGTTTAGTTTAATTAATTTATGTTTATTTCATATTATCATGTTATT
TTGATCGAAATGTTTATGAAGTGTTTTCTTTTAAAAATGTTAATGTTTATGAACTATGAAGTGTGTGTGTGTGTGGGTTCTATATT
ACGAAGTGGCTTAATTACTTGTGTGGACGACTACTAATAAATTATATGAATGATAGATTTTTATTTTGGGGTATGTTCACGGCTCA
TATGATTATTCTATTTTGAGAGTTTGTATATTATACTATATATTTATAACATTTCTCTTTTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876048 hypothetical protein ARALYDRAFT_485424 [Arabidopsis lyrata subsp. lyrata]8523e-089
AAM20498 calmodulin-like protein [Arabidopsis thaliana]8498e-089
NP_190646 putative calcium-binding protein CML41 [Arabidopsis thaliana]8443e-088
XP_002533274 Calmodulin, putative [Ricinus communis]4993e-048
XP_002310779 predicted protein [Populus trichocarpa]4823e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q8L3R2 Probable calcium-binding protein CML418441e-089
Q9SRE6 Calcium-binding protein CML382831e-024
Q8RYJ9 Putative calcium-binding protein CML232742e-023
Q9SRE7 Calcium-binding protein CML392642e-022
Q9C8Y1 Probable calcium-binding protein CML232581e-021

TrEMBL top hits (Blast detail)Scoree value
B9T4V5 Calmodulin, putative4992e-048
B9HEM5 Predicted protein4822e-046
B9T4V6 Calmodulin, putative4705e-045
A5ATQ9 Putative uncharacterized protein4696e-045
A5C797 Putative uncharacterized protein4642e-044

Arabidopsis top hits (Blast detail)Scoree value
AT3G50770.1 calmodulin-related protein, putative8459e-091
AT1G76650.1 calcium-binding EF hand family protein2831e-025
AT1G76640.1 calmodulin-related protein, putative2642e-023
AT1G66400.1 calmodulin-related protein, putative2581e-022
AT5G42380.1 CML37 (CALMODULIN LIKE 37); calcium ion binding2571e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  33%
 
64  67%

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