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Information for unigene UN10005
| FASTA Sequence |
| Unigene ID: UN10005 | Length: 804 |
SSR | | AAGCACAAACAAAACAATCTTATTCCGCAAGTGTTCCCTCTAATGGCGAGAGAGAAAAACAAATCTCCAACGGTGAAGAAAACTCC
CATGGCGTCAAAAGAGAAGCCAAAGAAGCTGAGAAAACCCAAAACCACCACTCATCCTCCATATTTTCAGATGATAAAAGAGGCTT
TGATGAATCTAAAAGAGAAGAACGGGTCGAGCCCTTACGCTATAGCAAAGCAGATAGAGGAGAAATACAAACCTGTACTCCCTGAG
AATTTCCGTAAAACACTTTCTCTGCAGCTTAAAAACTCTGTCGCTAAAGGCAAGCTCGTGAAGATCAGAGCCTCATACAAGCTCTC
AGAGACGACCACGAGGACGACGAGGCAGCAGCAGAAGAAGAAGAAGATGGAGACTCGGTCGAAGAAGACTGTGAGCAAGCCTCCAG
AAATGGTGACGAAGAATAAGAGGACAGCAAAGAAGCCAAGACAGCTTAAGTCGATCAAGTCTCCAGGTTCTAAGAAGGTCTTGAGA
GCTTCCGCTTCTTGATCGACAAGAAAGACGAAGAGGAGAGGGTGTGTGAATATGAATAATAAGGGTTTTCTCTGTAAAATAGTTGA
CTCTGTTTTTGGTTTCGGGGGTTACTCCTTCTTTAGGGCTTATAAGGATAATGAGTCATGGTATGTATACAACTACGTACTTTTCA
ATGTAATATATGCAATAACTTGTGGCTGTATAGCCCTACGACTGCGGTCTGCGGAGAGACCATACCTATGTTCTTGTTTTACTATG
TTTGCAGTGAATATAAATTTGAGCCAGCAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179396 histone H1-3 [Arabidopsis thaliana] | 469 | 7e-045 |
| XP_002884107 hypothetical protein ARALYDRAFT_480711 [Arabidopsis lyrata subsp. lyrata] | 432 | 1e-040 |
| ACD99685 histone H1-like protein [Camellia sinensis] | 389 | 1e-035 |
| NP_849970 histone H1-3 [Arabidopsis thaliana] | 375 | 6e-034 |
| ACU15107 unknown [Glycine max] | 361 | 2e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| P94109 Histone H1 | 469 | 5e-045 |
| B3GQ70 Histone H1-like protein | 389 | 9e-036 |
| Q3EBY3 Uncharacterized protein At2g18050.2 | 375 | 4e-034 |
| C6T0S3 Putative uncharacterized protein | 361 | 2e-032 |
| B9SZV0 Histone h1/h5, putative | 356 | 6e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 470 | 2e-047 |
| AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 376 | 2e-036 |
| AT2G30620.1 histone H1.2 | 240 | 1e-020 |
| AT1G06760.1 histone H1, putative | 231 | 1e-019 |
| AT1G48620.1 HON5 (High Mobility Group Family A 5); DNA binding | 114 | 4e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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