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Information for unigene UN10012

FASTA Sequence
Unigene ID: UN10012Length: 1703 SSR 
GGGCTGCCTGGCAACTTGGGAGTCCGACAGCCATTGCGACTTTGTCCTTCTTCTCCTCTTTAGCTACCTTACACAATCGGAATCCA
ATGTTCTACCATCAGCAGCCGCAACTTCTTTTTGTTCCCCACTTGAATAACTTGAAGAAGAAGAAGAAGAACGCTTTCATATGTTT
CGCTTGTTCCATCAAACAAACCAGAGTTCGTAAGAGAGTGAAGAGCAACGAGGAGCTACGTAATGAGATTCTAGAGTTCGTTGCTT
TGGCTGGCCTTCCTCCAGGTCACGTCCCCTCCATGAAGGAACTCTCTGCTCATCAAAGAGTTGATCTTGCCAACGTTGTAAGACGA
AGAGGATATAAGTTCATCAGGGAGCTTCTTGCAAACTCTGAAGACTGTACTGAGCTTACAAGTGCAAGTGGCGTCTGTTTTGAAGA
CTCGTTAACAGAAGGTCAGGACGAAGAAGCACTTGACGGAAGCTTGTCTACTGAAAAACGACCTTCAAGCTCTCCGGAGAGAGAAG
CTGACAATGTTCTGGTGGCAGAGGAAGACGAGGAGGTCAACGATGTGGAAGAGGATTCCTCTCTTCTTAGCGATAATCATTACACC
AGTCAAGATCTCAGTCACAACACCAAAAACGTTGTTGAAAGTGTTGCTACTGAATCCTTGTCTGGTGAGGACAACCCTTGGCAAAT
GCAGAGAATTTTCAGAATCAGCAGATTGATCATATGGCTGAAAAACGTTCTGGCGATTGTTTAGTTGCGCCTGATGATAAAGATTG
GATGTTAGGACTTCCTTCCTCAACTTCAAGCATAGAAGAAAAAAACAACCAGATTTATCCAGAACGGATACTTGGATACAGTTGAT
GATGATGATGAAAATGACAGACTCAATGAAGAAACAAACAAAGGTGGTGAGTACAGTCAGAGAAGTGTGAGTATGGCGCCAAACGG
AAGCGCCCTAGCATATGAGGAGGTTACCCATGCGACACAAGTTAATAACTCTAAAAGGAATAGTGATCAAAGACATGGGAATGCTG
AACTGGACAAGGATTCACATGATGAGGACATGAAACGGGAAAATCAGGTTGAAATTACTCGGCTGAGGTTCATGCTGCGTCAAAAA
GAGCTGGAGCTGTCAAGGTTAAAAGAGCAGATTGAAAAGGAAAAGCTGTCTCTATCTGTTCTTCAAAGAAAAGCTGAAACAGAGAT
ACAAAAGGCCCAAATGCTTGTTTCACAGAAGGATGTTGAATTGCAAGAAGCTGAGGAAAGTTTTTCAGGACTGCAAGAGGTTGAGA
TTGAATATTGCGGAGATGGTAATGTTGTGGAGGTTACTGGCAGCTTCAATGGCTGGTAACACCGAGTGGGACTGGAGCTTGAAACA
TCCAAGTCAACCGGGAAACAGAAATGCTGGTCAACATTACTGTGGTTGTATCCTGGTACATATGAGATTAAATTCATCGTGGACGG
TCAATGGATAACCGATCCTCAAAGAGATTCAGTTACAAGAGGACACGTCACAAACAACATTTTCAAAGTAAATCAAGAGCCTCGCA
GATGATGGTTACCAGCTTAAACAGAGGAAGGAGCAGAGCATGTTATCAACTTTTCCGATGATCATTTTCATGTATAAGGTGTTTTG
CTCTGTTTTTAGAGGTGTTAGAGTATGTACAAAGTTACAATTTCAGGTAATCGATTAAATAAATATCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871033 hypothetical protein ARALYDRAFT_487117 [Arabidopsis lyrata subsp. lyrata]9226e-097
NP_195962 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana]8761e-091
XP_002326201 predicted protein [Populus trichocarpa]5598e-055
XP_002519478 hypothetical protein RCOM_1354150 [Ricinus communis]5481e-053
CBI30142 unnamed protein product [Vitis vinifera]5249e-051

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9MTG2 Predicted protein5595e-055
B9S0F9 Putative uncharacterized protein5481e-053
Q9LZE6 Putative uncharacterized protein F12E4_1704242e-039
A9SL89 Predicted protein3104e-026
B9IFV2 Predicted protein2129e-015

Arabidopsis top hits (Blast detail)Scoree value
AT5G03420.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 5'-AMP-activated protein kinase-related (TAIR:AT1G27070.1); Has 1365 Blast hits to 895 proteins in 182 species: Archae - 6; Bacteria - 436; Metazoa - 414; Fungi - 132; Plants - 56; Viruses - 2; Other Eukaryotes - 319 (source: NCBI BLink).9455e-102
AT1G27070.1 5'-AMP-activated protein kinase-related1964e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  80%
 
61  20%

Unigene MembersMember information