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Information for unigene UN10046
| FASTA Sequence |
| Unigene ID: UN10046 | Length: 1990 |
SSR | | GGACAAGACATAAAAACAAGAACAAAGCCCCCTTATTGACTCACCATACTTCTTAGAATCAGGAAAAGTGAAGAAGCGAAAGAGAG
AAGAAGAAGAAAGTCGGATGGGAGTGGATTACTACAACGTCCTTCAAGTCGATCGCAACGCCTCAGACGATGATCTTAAGAAAGCT
TACAGAAAACTCGCCATGAAATGGCATCCCGACAAGAACCCCAACAACAAAAAGGACGCGGAAGCCAAGTTCAAGCAGATCTCCGA
AGCCTACGAGGTTCTTAGTGATCCCCAGAAGAAGGCTGTGTACGATCAGTATGGCGAGGAAGGCTTGAAAGGGAACGTCCCTCCTC
CAGATGCTGGTGGAGCCACTTACTTCTCTACCGGAGACGGTCCAACTTCCTTCCGGTTCAACCCGAGAAGCGCAGACGATGTATTT
GCCGAGTTCTTTGGGTTCTCCGGGCCGTTTGGTGGTGGTGGTGGTACAAGATTCTCTAGCAGCATGTTTGGAGATAACATCTTTGC
CTCTTTCGGTGAAGGAGGAGGAGGAGGAGGAGCTATGCATCATAGTGTACCCAGGAAGGCGGCTCCTATCGAAAACAAGCTGCCTT
GTAGCCTTGAAGATCTCTACAAAGGAACCACCAAGAAGATGAAGATCTCGAGGGAGATTGCTGATGTCAGCGGGAAGACGATGCCG
GTGGAAGAGATATTAACGATTGATGTGAAGCCAGGGTGGAAGAAAGGCACAAGAATCACATTCCCTGAGAAAGGAAACGAGCAACC
CGGTGTCACTCCAGCTGATTTAGTCTTCATCATCGACGAGAAGCCTCACCCGGTTTTCACTCGGGAGGGCAATGACCTCGTAGTTA
CACAGAAGATCTCGCTTGTTGAGGCCTTGACCGGCTGCACTGTGAACCTGACAACACTCGATGGTCGAAGACTGACAATCCCAGTC
ACCAGTGTGATACACCCAGAGTACGAGGAAGTGGTTCCAAAGGAAGGAATGCCGTTGCAGAAAGATCAGACAAAGAGAGGAAACTT
GAGGATCAAGTTCAACATCAAGTTCCCAACGAGATTAACCTTAGAGCAGAAGACAGGAGTAAAGAAGCTTCTTGGATAAATTGAGC
TGTTATCAGTGAGTAACATACCAGTCAAAAGCAATGTAGAACAGAGGAAGAGAAAGATTTAAGCTTCTGTCATGTGTCGATCAGAG
AGATTGTGATTATTACTGTTGTATCCTTTTTGGTCGATCTGTAATAAAATACTCGTAATAAAATTTGTTTGTTGTAATCTAAATCA
CCATTCCTATAGATGCAAGAGTACTATTGTTTTTAATCACATCCTGATCCTGATGTACACAGAACAGTTGCAACACTGAACAGATC
TCAGTCCAGAAAGGCTTGCGATCATCTCCCGCAACAAACTCTTGAACAACATTGTCCACTTCTATCAAGCTACAACCTGGCGTTCT
CTTCATGTTCCCGTTCCTTATCACCTTCCTCAACCTCGAAACCTCCTCCCACTTCCCCAAATCTGCATAAATATTGGAAAGCAGAA
CATAGTTCCCCATATCCTCAGGCTCTAGCTCAACAAGATGGTCCATTGCGAGCAGAGCAACATCGAGATTGCTTCGCGTTCTGCAA
GAGCTCAACAACGACCCCCAAATCTTCGAGTCAGGTTTCATCGGCATCGTCTTTGTTACTTCAACAGCTCGTTCCAGTTCCCCTGC
TCTTGCCAAAACATCGATCAGACAACCATAGTGTTCAATCTTGGGTTCGATCTGATAATCTTCCCTCATCATATCAAAATACTTCA
GACCTTGTTGCCACAACCCAACATGAGAACAAGCTGATAACAGGCCAAGAAACGTTATCCCGTTAGGCCTCACTATCGCTCTCCGC
ATTTCATTGAATGTTTCCATTGCTCCGTCAGCGTCCCGTGATGTGCATACCCCGAGATCATCGTACTCCACGATATAACATCTTTC
CCCTTCATCTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179646 DNAJ heat shock protein-like protein [Arabidopsis thaliana] | 1653 | 1e-181 |
| XP_002886287 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 1641 | 3e-180 |
| XP_002869499 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 1537 | 4e-168 |
| NP_194577 DNAJ heat shock protein [Arabidopsis thaliana] | 1515 | 1e-165 |
| XP_002517853 Protein SIS1, putative [Ricinus communis] | 1438 | 1e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SIL5 Pentatricopeptide repeat-containing protein At2g20540 | 948 | 3e-101 |
| O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic | 471 | 6e-046 |
| Q9LN01 Pentatricopeptide repeat-containing protein At1g08070 | 469 | 1e-045 |
| O81767 Pentatricopeptide repeat-containing protein At4g33990 | 466 | 2e-045 |
| Q9LNU6 Pentatricopeptide repeat-containing protein At1g20230 | 460 | 1e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SIL3 At2g20560/T13C7.15 | 1653 | 9e-182 |
| O49457 Heat-shock protein | 1515 | 9e-166 |
| B9RVT4 Protein SIS1, putative | 1438 | 8e-157 |
| B9RB96 Protein SIS1, putative | 1412 | 8e-154 |
| B9N3J3 Predicted protein | 1403 | 9e-153 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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