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Information for unigene UN10068

FASTA Sequence
Unigene ID: UN10068Length: 973 SSRSNP
TTTTTTTTATCATAGAAACTTAAAGCAGAATAAATATAATTTAAAAAAAAAAATGGGAGGCTGCTGCTTTCTCTTCTTATTCGTTG
TTGTGCTCCTCTCTCTCCTCCTCCTCCTCAGTTGACGCTTGCGACCGATGTCCTCACCGCTCTAAGGCTGCTTTCTTCTCCTCCGC
ATCTGCCCTATCCTCCGGAGCTTGTTCTTATGGTTCTATGGCTACGGGTTTTTTCGCCGGTCACATCGCCGCCGCCGTTCCTTCCA
TCTACAAAGACGGCGCTGGCTGCGGTGCTTGCTTTCAGGTCAGATGCAACAACCTCACTCTTTGCAGCACCAAAGGAACCACGGTG
ATGGTCACCGACCTCAACATGAGCAACCAGACCGATCTCGTCCTCAGCAGCAGAGCCTTCAGGGCCATGGCCAAACCGGTTGTCGG
CGCTGACACAGATCTTCTCAGACAAGGCATCGTCGACATTGAATATCACAGAGTTCCTTGCGATTACGGAAAGAAGAAAATGTTGA
ATGTGAGAGTTGAAGAATCAAGCAAAAAACCATACTACTTGGCTATAAAGCTCTTGTACCAAGGAGGCCAAACCGAAGTCGTAGCT
ATCGACATTGCTCAGGTTGGTTCCTCCAACTGGAGTTACATGACCCGAAGCCACGGTGCCGTATGGGTCACTGACAAAGTACCCAC
CGGATCTCTTCAGTTCAGGTTCTTGGTGACAGCTGGCTACGACGGCAAAACGCTCTGGTCTCACAAGGTTCTTCCTGCCAACTGGG
AAGCCGGCAAGACCTACGACGCCGGCGTTCAGATCACCGACATTGCTCAGGAAGGCTGTGATCCATGCGACGATCACATCTGGAAC
TGACTTTGACTTACTTCTCCTTTTTTTCTTTCTTTCTTTCTTAGAAGCATTCCTTATATCATCATCATGTACTATAAATAATCAAA
ACCATTAACTGAGATTCTACCAGAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195553 expansin-like A2 [Arabidopsis thaliana]11689e-126
XP_002868845 hypothetical protein ARALYDRAFT_490602 [Arabidopsis lyrata subsp. lyrata]11607e-125
XP_002875760 hypothetical protein ARALYDRAFT_484976 [Arabidopsis lyrata subsp. lyrata]11553e-124
NP_190183 expansin-like A1 [Arabidopsis thaliana]11463e-123
AAM63819 Expansin-like 1 precursor (At-EXPL1) (Ath-ExpBeta-2.1) [Arabidopsis thaliana]11463e-123

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVE5 Expansin-like A211684e-127
Q9LZT4 Expansin-like A111461e-124
Q9LZT5 Expansin-like A310798e-117
Q7XCL0 Expansin-like A27501e-078
Q10S70 Expansin-like A17061e-073

TrEMBL top hits (Blast detail)Scoree value
Q8LC65 Expansin-like 1 (At-EXPL1) (Ath-ExpBeta-2.1)11462e-123
B9DH60 AT3G45960 protein10791e-115
B9HQZ5 Putative uncharacterized protein PtrEXLA29553e-101
B9T775 Beta-expansin 1a, putative9463e-100
A9PAL4 Putative uncharacterized protein9275e-098

Arabidopsis top hits (Blast detail)Scoree value
AT4G38400.1 ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)11693e-128
AT3G45970.1 ATEXLA1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A1)11479e-126
AT3G45960.2 ATEXLA3 (arabidopsis thaliana expansin-like a3)10851e-118
AT3G45960.1 ATEXLA3 (arabidopsis thaliana expansin-like a3)9382e-101
AT4G17030.1 ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)3808e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  15%
 
94  31%
 
105  38%
 
62  15%

Unigene MembersMember information