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Information for unigene UN10077
| FASTA Sequence |
| Unigene ID: UN10077 | Length: 933 |
| SNP | GGAACACTTAACAGAGAGAGAGATTTTAGCTAAACTAAATCAATGGCGGCGATGATAGTAAAGGCTGGACTTTTCGCCGCCCTTCC
TCTCCGTGGTCAACTCCCTCGTTGCTTCTCCTCTTCATTGAAAACAACGACTACGGTAGTGGCAGTTTCTCGATCTCTTGGAATCT
CTGCCGTTAATAACCATCACCGTCGAAGCTCCTGGCCTCGAGTTACTACTTTCTGCACGGCAGCGACGACGGTTTCAGCGGATGAA
CCGGAGAAGAAGATCGAGTCTGTTGAGGAGGAGGTGGAGGAGAATGTGAAGGAGACGGCGAATCTGTTAGACATAAGAGTAGGAAG
AATCGTGAAAGCTTGGCAACACGAGGAGGCTGATTCTCTGTATGTTGAAGAAGTCGATATAGGCGAAGCTGAGCCGAGAATCATCT
GCAGTGGTCTCGTCAAATACGTACCTCTCGATCTCCTTCAGGGTGCATCAGTTGTGGTGTTGGCTAATCTGAAGCCAAGAAACATG
AGAGGAGTCAAGTCATGTGGTATGCTTCTCTGTGCTTCCGACTCATCTCATGAGAATGTTGAGCCTTTGGTTCCACCACAAGGGTC
TGTTCCTGGGGACAGAGTTTGGTTTGGTAATGAAGAAGAACTCGAGCAGCTTCCTGAGCCTGCACCTCCTAACAAGGTTCAGAAGA
AGAAGATGTGGGAATCGGTTCAACCCCTGTTGAAGACTGATGATTCTTGTGTTTCGATGCTTAAGGAGCATTTGATGCGGACATCT
TCTGGTCTTGTTACTTCCAACACTTTGAAAAATGCCAACATTTCTTGATTTACTGTATTTGTTTTCAGAGAGATATGAAGAACAAG
CCACTAGAGCGAATTTTTTTATTGCAATTTAACTGATGTTTTTTTTTGGTTGATTCATCAATAAGGGTTGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878307 tRNA-binding region domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1023 | 5e-109 |
| NP_191557 Nucleic acid-binding, OB-fold-like protein [Arabidopsis thaliana] | 1014 | 6e-108 |
| XP_002529219 methionyl-tRNA synthetase, putative [Ricinus communis] | 702 | 9e-072 |
| XP_002331598 predicted protein [Populus trichocarpa] | 666 | 1e-067 |
| XP_002280840 PREDICTED: hypothetical protein [Vitis vinifera] | 660 | 6e-067 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4KM49 Tyrosyl-tRNA synthetase, cytoplasmic | 364 | 6e-034 |
| Q7ZX51 Tyrosyl-tRNA synthetase, cytoplasmic | 362 | 1e-033 |
| Q5R8T5 Tyrosyl-tRNA synthetase, cytoplasmic | 360 | 2e-033 |
| Q91WQ3 Tyrosyl-tRNA synthetase, cytoplasmic | 359 | 2e-033 |
| Q29465 Tyrosyl-tRNA synthetase, cytoplasmic | 358 | 3e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M1X8 Putative uncharacterized protein | 1014 | 4e-108 |
| B9STA0 Methionyl-tRNA synthetase, putative | 702 | 6e-072 |
| B9N8K9 Predicted protein | 666 | 9e-068 |
| C6SX59 Putative uncharacterized protein | 650 | 6e-066 |
| B6TMN2 Multisynthetase complex auxiliary component p43 | 621 | 1e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G59980.1 tRNA-binding region domain-containing protein | 1015 | 2e-110 |
| AT2G40660.1 tRNA-binding region domain-containing protein | 313 | 4e-029 |
| AT4G13780.1 methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative | 300 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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