Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10086

FASTA Sequence
Unigene ID: UN10086Length: 1089 SSR 
GGGACCTTAAGCAAAGTCTTCGAAGAGCAGCCACAACAAACTCTCTCTCTCTCTACATCTCTCCTCTCTGTTTTTAGGGTTTTCTT
AAAAACGGAGAAAGATGTTCAGAAGAGGACCTTCGAGTAAGAGCGACAACACCAAGTTCTACGAGATCCTCGGCGTCCCCAAGACC
GCCTCACCTGAAGATCTCAAAAAGGCTTACAAGAAAGCCGCCATCAAAAACCATCCCGACAAGGGTGGAGATCCCGAGAAGTTCAA
GGAGCTAGCTCAGGCTTATGAAGTTCTAAGCGATCCAGAGAAGCGTGAGATCTACGATCAGTATGGTGAGGACGCGCTCAAGGAAG
GAATGGGCGGTGGAGGCGGTGGTCACGACCCCTTTGATATCTTCTCCTCCTTCTTTGGTGGTGGTGGTGGTGGACACCCTTTCGGA
GGTGGTAGTAGCCGTGGAAGGAGGCAGAGGCGTGGTGAAGATGTTGTTCACCCTCTGAAGGTTTCTCTAGAGGATCTTTATCTTGG
GACAACGAAGAAGCTTTCGCTTTCTAGGAAGGCTTTGTGCTCAAAGTGTAACGGAAAGGGTTCGAAGTCTGGAGCTTCGATGACGT
GCGGTGGATGCCAGGGATCGGGAATGAAGGTGTCGATCAGGCAGATCGGACCTGGGATGATTCAGCAGATGCAGCATCCTTGTCAT
GACTGCAAGGGCACAGGAGAGACCATCAACGATCGTGGTAGGTGCACAGTGCAAAGGAGAGAAGGTTGTTTCCGAGAAGAAGGTGC
TTGAAGTAGCTGTGAAGAAGGCTCGTGCTCAGAGAGAGGCTTATGATGATGACGACGATGATGAAGAAGGTCCAGGCTGTGCTCAG
CGTGTGCAATGTGCCCAGCAGTGAGATATCCAAATGCTGCTGGTTACGATTTTTTTTAATAGACTTTTGCCGGTTTTGTGGCAAGA
AACTCGTGTCCTTATTCAAAATGCTGGTCAAGATCTTTTGTTTTTTGTTTTTGGTTTTTTTTTTTTTCAGAATAAACTTTTACTAC
TAGTTGTCGAGATCTTGTCATTACCGCCAAGAATTCAATGGATCTAGTTTCGTGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874044 hypothetical protein ARALYDRAFT_489058 [Arabidopsis lyrata subsp. lyrata]10415e-111
NP_568412 chaperone protein dnaJ 2 [Arabidopsis thaliana]10254e-109
NP_189997 chaperone protein dnaJ 3 [Arabidopsis thaliana]10192e-108
NP_850653 chaperone protein dnaJ 3 [Arabidopsis thaliana]10192e-108
AAK74013 AT3g44110/F26G5_60 [Arabidopsis thaliana]10192e-108

Swiss-Prot top hits (Blast detail)Scoree value
P42825 Chaperone protein dnaJ 210252e-110
Q94AW8 Chaperone protein dnaJ 310198e-110
P43644 DnaJ protein homolog ANJ19382e-100
P42824 DnaJ protein homolog 29283e-099
Q04960 DnaJ protein homolog9212e-098

TrEMBL top hits (Blast detail)Scoree value
Q0V7U1 At5g2206010253e-109
Q0WW92 DnaJ protein homolog atj310191e-108
Q3EAQ4 Putative uncharacterized protein At3g44110.210191e-108
Q0GLI7 Molecular chaperone DjA29698e-103
Q38HT9 DnaJ-like protein9625e-102

Arabidopsis top hits (Blast detail)Scoree value
AT5G22060.1 ATJ2; protein binding10252e-111
AT3G44110.1 ATJ3; protein binding10197e-111
AT3G44110.2 ATJ3; protein binding10197e-111
AT4G39960.1 DNAJ heat shock family protein4013e-039
AT2G22360.1 DNAJ heat shock family protein3825e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
92  50%

Unigene MembersMember information