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Information for unigene UN10088
| FASTA Sequence |
| Unigene ID: UN10088 | Length: 982 |
| SNP | GGGAGTATTGACGAAGGAAAAGAGAATAATCCCTTTTCCGCGTTTCCTGACCAAAAGTTTCATAACTGAGATTTGTTCCAACTCCG
ATCGTAGGTTTCGCTGATTCGAGCTCGCGTCAAAATCCTATTCAAAGTTTCCGAGATTTCGATCATGATGAATTCCATCTTCGGAA
AGCGGAAAACTCCTGCAGAACTACTGCGGGAAAACAAGAGGATGCTCGATAAGTCAATCAGAGACATCGAGAGGGAGAGACAAGGC
CTTCAAACACAAGAGAAGAAACTTATTACCGAGATTAAGAAGACCGCAAAGCAGGGCCAGATGGGAGCTGTGAAAGTGATGGCAAA
GGACCTTATCAGAACACGGCACCAGATTGAGAAGTTTTACAAGCTTAAATCCCAGCTCCAAGGTGTATCTCTCAGGATCCAGACTT
TAAAATCAACACAAGCAATGGGAGAGGCAATGAAAGGCGTGACTAAAGCAATGGGGCAAATGAACAGACAGATGAATCTTCCATCT
CTGCAGAAAATCATGCAAGAGTTTGAGAGGCAGAACGAGAAAATGGAGATGGTCTCCGAGGTGATGGGAGATGCTATTGATGATGC
CTTGGAAGGAGATGAGGAAGAGGAAGAGACTGAAGATCTTGTTAGCCAAGTCCTTGACGAGATCGGTATCGATATCAACCAAGAGC
TGGTGAATGCTCCATCTGGTGCGGTGGCTGCACCAGCAGCAAAGAACAAGGTGGTGCAAGCTGAGGCGGCCGGAGCTGAGGACGGT
GGGGGAATTGATAGTGATCTTCAGGCAAGGTTGGACAACCTTCGAAAAATGTGAGGCTTTCCCGGTTTCTGTATAATATTGTTGAT
TTGTTACCTGATTATTACTTTTAAACTCCAAAGGAATATATGGCAAACCAGAGTTTTAAGGATGTGTTTGTAATCATTTCATAATT
TGAGCCCCTGAATTTATAAAATCTCATTGTTGTCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565336 vacuolar protein sorting-associated protein 2-1 [Arabidopsis thaliana] | 1082 | 8e-116 |
| AAM67006 unknown [Arabidopsis thaliana] | 1077 | 3e-115 |
| CAF31658 putative Snf7-like protein [Arabidopsis thaliana] | 1010 | 2e-107 |
| CAF31716 putative Snf7-like protein [Arabidopsis thaliana] | 1009 | 2e-107 |
| XP_002514068 Charged multivesicular body protein 2a, putative [Ricinus communis] | 1008 | 3e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SKI2 Vacuolar protein sorting-associated protein 2 homolog 1 | 1082 | 4e-117 |
| O43633 Charged multivesicular body protein 2a | 629 | 1e-064 |
| Q9DB34 Charged multivesicular body protein 2a | 629 | 1e-064 |
| Q54DB1 Charged multivesicular body protein 2a homolog 2 | 620 | 1e-063 |
| Q7ZW25 Charged multivesicular body protein 2a | 611 | 1e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RK24 Charged multivesicular body protein 2a, putative | 1008 | 2e-107 |
| B9N5E3 Predicted protein | 1004 | 6e-107 |
| A5AFU2 Putative uncharacterized protein | 983 | 2e-104 |
| B9GKV8 Predicted protein | 983 | 2e-104 |
| B7FH94 Putative uncharacterized protein | 980 | 4e-104 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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