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Information for unigene UN10090

FASTA Sequence
Unigene ID: UN10090Length: 1356 SSR 
GGGATCACAAACAACCAAAACAGCCGAACAATCCTATAAAACCATTTCTCTTAAATCCTTTACAACACACAATAAAGTTTTTGCCA
AAATAAAAACAAACAATAAAAGTTTTTTTTTTAATCTTTCGCTAAGTCTCGTGAACGATGGTGTCTAAGAACGTTTTGGTAACCGG
CGGTGCTGGATATATCGGAAGTCACACGGTGCTTCAACTGCTCACCGGCGGTTACTCCGCTGTAGTTGTCGATAACCTCGACAATT
CCTCCGCCGTTTCGCTCCAGCGCGTGAAGAAACTCGCCGCAGAACACGGCGAACGCCTCTCCTTCCACCAGGTTGATCTCAGGGAT
AGACCTGTCCTTGAGAAGATCTTCTCAGAAACAAAGTTTGATGCAGTGATACACTTTGCTGGACTTAAAGCAGTCGGTGAGAGTGT
AGACAAGCCTTTGCTGTATTATAATAACAATCTTGCTGGGACTATTACGCTTTTGGAAGTTATGGCTCAACACAACTGCAAAAATC
TTGTGTTTTCATCATCAGCAACTGTGTATGGCTCACCAAAAGAAGTTCCTTGCACAGAGGAGTTTCCAATCTCAGCATTGAACCCA
TACGGACGAACAAAGCTATTCATTGAGGAGATCTGTCGTGATGTATATGGCTCTGACCCGGAATGGAAGATCGTATTGCTTAGGTA
TTTCAACCCTGTTGGTGCACATCCTAGTGGTGACATTGGTGAAGATCCTCGGGGTATTCCAAACAATCTCATGCCTTTTGTACAGC
AAGTCGCTGTTGGAAGGAGACCTCATCTCACTGTCTATGGAAGTGACTACAACACAACAGATGGAACAGGGGTTAGAGATTACATT
CATGTAATGGATTTAGCTGATGGACACATAGCCGCTCTCCGCAAGCTAGAGGATTGCAAAATCGGTTGTGAAGTGTACAATCTTGG
AACTGGAAATGGAACATCTGTTCTTGAAATGGTTGATGCCTTTGAAAAAGCGTCTGGGAAGAAAATCCCTCTGGTGACTGCTGGAC
GTCGTCCGGGAGATGCTGAAGTTGTCTATGCATCAACGGAGAGAGCAGAAAGCGAATTGAATTGGAAAGCCAAATACGGGATTGAG
GAGATGTGCAGGGACTCGTGGAACTGGACTAGTAATAATCCTTATGGATATGATTCCTCTGATGCCTGAAGATTTCTCATTATCCC
TCGTTATTCTTATTTTCTTTTAACTTATTTGTCTACCTATACCATGTGTTAAACACTCACAGGAAAAGGCTGATTTAAAGAAAATA
TTGAAGTTGCGTTGTATATTATTATCATTTTAATAATAATAATAATAATCATATCTTTACTGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874660 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 [Arabidopsis lyrata subsp. lyrata]17407e-192
NP_192834 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 [Arabidopsis thaliana]17334e-191
AAM62752 UDP-galactose 4-epimerase-like protein [Arabidopsis thaliana]17301e-190
AAC33955 Similar to uridine diphosphate glucose epimerase; F8M12.10 [Arabidopsis thaliana]17282e-190
XP_002869754 UDP-D-glucose/UDP-D-galactose 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]16134e-177

Swiss-Prot top hits (Blast detail)Scoree value
Q9SN58 UDP-glucose 4-epimerase 217332e-192
Q9T0A7 UDP-glucose 4-epimerase 315961e-176
O65781 UDP-glucose 4-epimerase GEPI4814957e-165
Q42605 UDP-glucose 4-epimerase 112422e-135
Q43070 UDP-glucose 4-epimerase12376e-135

TrEMBL top hits (Blast detail)Scoree value
Q541V9 Putative UDPglucose 4-epimerase15962e-175
Q8LFW1 UDPglucose 4-epimerase-like protein15837e-174
B9GL51 Predicted protein15147e-166
B9GXJ3 Predicted protein15121e-165
A9PG00 Putative uncharacterized protein15084e-165

Arabidopsis top hits (Blast detail)Scoree value
AT4G10960.1 UGE5 (UDP-D-glucose/UDP-D-galactose 4-epimerase 5); UDP-glucose 4-epimerase/ protein dimerization17332e-193
AT4G23920.1 UGE2 (UDP-D-glucose/UDP-D-galactose 4-epimerase 2); UDP-glucose 4-epimerase/ protein dimerization15961e-177
AT1G64440.1 RHD1 (ROOT HAIR DEFECTIVE 1); UDP-glucose 4-epimerase/ protein dimerization14822e-164
AT1G12780.1 UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1); UDP-glucose 4-epimerase/ protein dimerization12421e-136
AT1G63180.1 UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3); UDP-glucose 4-epimerase/ protein dimerization12313e-135

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  38%
 
101  13%
 
82  25%
 
92  25%

Unigene MembersMember information