 |
Information for unigene UN10107
| FASTA Sequence |
| Unigene ID: UN10107 | Length: 1083 |
| SNP | GGTGCGAAGGCTTGACCGATAGTAATCATAACACAGGGGTTCATGACAACAAGGTATTTTAACTAGCAAGTATAGTCATAAGTAGA
GCTTTACAATATACAAAAAAGTATATTTTCTTATCCCGAAACCATTACACACAAGCTCTACAGATCTTCAGGTACCACGGAGGGCC
CGAACACGTTCTTGAATCAACTTCCTTTCCCAGTCCGCAACATCCTCGAATGCGTTCTCAGGGAGATTCTCAAAGGGCTCTTTCCA
CGGATCGTTCTTGGCCAGATCATATGTAGCCCCACGTATAGCTCCTTTGTTAGGCCCACATGGACGCTTTGACACCAATGCGTCAT
AAGCCGTGTTCAGGTTCATGTCACAGAACCAATACATATAAGCAATAGAAACCGCAGGAGCTCTTCCCAATCCGGCTGTGCAATGC
ACGTAAACTCTCCCTTTACCTTCTGACACCGCCCATTCCAGAGAAGACACAGCTTTCGGAAGCTGGCTTCTTAACGACAGCGGATC
AAAGTCTTTAGCGGGTCTTCTCATGTGACGGATTCCGAGCTCTTTACATCTTTTGACAATGGAGTCAAGATCGATTCCCCAGTACT
CAACGTCCTTGTCTTGTTGCAAGTTAAGTATGTAAGCAACATTCTCTTCTTGTCTCAAGTGATCTATGTCCTCTGGCTTCTGTGGC
TGCGACCCAACGATCAGTTCCTCTCTTATCAATCTATAATTCATGCCGAGATCATGATGATACTCATATGGGCTCCTCATCAGTCT
CTTCATAGCTGTATTGTAATCTTCCATCTTGTTCTTGGATCTGAGAGAAACCCCATTGTTCCCTGGATTCTTCTCCTCGGCTCCGT
TGCCTGAGATTTTGCAGGAAACTCCCAGGTTTCTGGGGAATCTTCTTGGATCGATCGATGGTTTGTGCCGGGAAGACTTTTCAATT
TCTCGGAAGTGACTCGTTAGGGAGAAAATAGAGCTACTGCTTCCAACGACGCTCATCGTTTCTTCTCTCACTCACTCACTCACTCT
CTATCACTTGTTCTTCTTCTCTGTGACTGTGATGCGACATTGGTATCTCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566383 dual-specificity protein-like phosphatase 3 [Arabidopsis thaliana] | 1277 | 2e-138 |
| AAM64580 unknown [Arabidopsis thaliana] | 1265 | 6e-137 |
| XP_002884823 hypothetical protein ARALYDRAFT_478435 [Arabidopsis lyrata subsp. lyrata] | 1246 | 9e-135 |
| XP_002520846 dual specificity protein phosphatase, putative [Ricinus communis] | 1061 | 3e-113 |
| XP_002325379 predicted protein [Populus trichocarpa] | 1037 | 2e-110 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SRK5 At3g10940 | 1277 | 2e-138 |
| Q8LBS6 Putative uncharacterized protein | 1265 | 4e-137 |
| B9S4C7 Dual specificity protein phosphatase, putative | 1061 | 2e-113 |
| B9IPI3 Predicted protein | 1037 | 1e-110 |
| C5YRM6 Putative uncharacterized protein Sb08g002770 | 933 | 1e-098 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10940.1 protein phosphatase-related | 1278 | 7e-141 |
| AT3G52180.1 SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase | 398 | 8e-039 |
| AT3G52180.2 SEX4 (STARCH-EXCESS 4); polysaccharide binding / protein tyrosine/serine/threonine phosphatase | 398 | 8e-039 |
| AT3G01510.1 5'-AMP-activated protein kinase beta-1 subunit-related | 282 | 2e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
