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Information for unigene UN10112
| FASTA Sequence |
| Unigene ID: UN10112 | Length: 1944 |
SSR | | GGAACCGGTGGCCAGTACAAGTACTACTTCAACATCGGTAGCGTCGACTCTTTCGAGGAGAAACTCGAAGAAGCTCAAGAAGCCTT
AGGCATTGATCCTCACCAGTACGTTCCCGTCACGTACACAACTGAGATGGTCTGGTTCCAAGAGTTTCTGCGGTTCGCGCCGACCC
TACTCCTCTTGGGCACTCTTGTCTACGGAGCCAGGAGGATGCAAGGCGGGTTAGGAGGTCTAGGAGGAACCGGAGGAAAGAACGGC
CGTGGAATCTTTAACATAGGCAAAGCCACGATAACGAGAGCTGACAAAAACTCCAAGGACAAGATTTATTTCAAGGACGTCGCTGG
ATGCGAGGAGGCTAAACAAGAGATCATGGAGTTTGTTCATTTCCTCAAAAACCCTAAAAAATACGAAGACTTGGGCGCTAAGATAC
CGAAAGGAGCGCTTTTAGTCGGTCCTCCCGGAACAGGAAAGAGCTTTTAGCCAAAGCAACAGCTGGAGAATCAGGCGTGCCGTTTC
TCTCTATCTCCGGTTTAGACTTCATGGAGATGTTCGTCGGTGTTGGACCTTCGAGGGTGAGAAACTTGTTCCAAGAAGCTAGACAA
GCTGCGCCGAGCATCATCTTTATAGACGAGATCGACGCCATCGGTAGAGCGAGAGGACGTGGAGGGTTAGGTGGTAACGACGAGCG
TGAGAGCACTTTGAACCAGCTGCTTGTCGAGATGGATGGGTTTGGTACGACGGCTGGAGTTGTGGTTCTCGCTGGGACCAACAGAC
CGGATATTCTTGATAAAGCTCTGTTACGTCCCGGCCGGTTCGATCGTCAGATAACCATCGATAAACCGGATATCAAGGGGCGTGAT
CAGATATTCCAGATATACTTGAAGAAGATCAAATTAGATCACGAGCCTTCTTACTACTCTCAGAGACTTGCTGCTCTCACTCCTGG
TTTCGCTGGTGCTGACATTGCTTATGTATGTAACGAAGCGGCTCTTATCGCTGCTAGACACGAAGGAGCGACCGTCACGATGGCAC
ACTTTGAATCTGCTATTGATCGTGTCATTGGTGGTCTTGAGAAGAAGAACAGAGTGATAAGTAAGCTGGAGCGTCGTACAGTTGCG
TATCATGAATCTGGTCACGCGGTTGCTGGTTGGTTCCTGGAACACGCGGAGCCATTGCTGAAGGTGACCATCGTGCCACGTGGAAC
AGCTGCGCTTGGTTTTGCTCAATACGTTCCTAATGAAAACCTTCTCATGACCAAAGAACAGCTCTTTGACATGACTTGCATGACTC
TAGGTGGCCGTGCAGCCGAGCAGGTATTGATAGGAAAGATCTCAACGGGTGCACAAAACGATCTAGAGAAAGTTACAAAGATGACA
TGCGCGCAAGTAGCTGTCTACGGTTTCAGCGACAAGGTCGGACTCCTCTCGTTTCCGCCGAGGGATGATGGATACGACTTCAACAA
ACCGTACAGCAACAAGACCGGCGCGATCATAGACGAGGAAGTGAGGGAATGGGTGGGGAAAGCTTACGAGAAGACGGTGGAGCTGA
TAGAGACGCACAAGGAGAAAGTGGCTGAGATCGCCGAGCTTCTGCTGGAGAAGGAAGTGCTGCATCAGGATGATCTTTTGAAAGTT
TTGGGTGAGCGTCCGTTTAAACCGGCTGAGTGACTAACTATGGCCGGTTCAAGTCTGGGTTTGAAGAGAGTGAGAAGAGAGTCCTC
CACAACGAGTGGTGCACCTGTGGTTGATGAAGGAGCTCCACCGCCGCTTGAGCCGCAGTGGTTCCTACGTAGGAGAGTGAGTGAGT
GAGTGAGTGAGTTCCACCTGTTACGATTGTAAATTTTTTTATTAAGAATGCAATAAAACACAACTAAAACAAACAAACAAACCAAA
AAGTCTCTTGTTCTTCAATGTTTGGTTAGTGATGAATATTATTTTTGTTACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881027 hypothetical protein ARALYDRAFT_344684 [Arabidopsis lyrata subsp. lyrata] | 2014 | 2e-223 |
| NP_850129 cell division protease ftsH-3 [Arabidopsis thaliana] | 2012 | 3e-223 |
| AAC33234 putative AAA-type ATPase [Arabidopsis thaliana] | 2012 | 3e-223 |
| AAL36270 putative AAA-type ATPase [Arabidopsis thaliana] | 2007 | 1e-222 |
| NP_172231 FTSH protease 10 [Arabidopsis thaliana] | 1914 | 7e-212 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84WU8 Cell division protease ftsH homolog 3, mitochondrial | 2012 | 1e-224 |
| Q8VZI8 Cell division protease ftsH homolog 10, mitochondrial | 1914 | 3e-213 |
| Q0DHL4 Cell division protease ftsH homolog 8, mitochondrial | 1823 | 1e-202 |
| Q8S2A7 Cell division protease ftsH homolog 3, mitochondrial | 1809 | 4e-201 |
| Q9Y4W6 AFG3-like protein 2 | 1251 | 2e-136 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SYC0 Mitochondrial respiratory chain complexes assembly protein AFG3, putative | 1854 | 4e-205 |
| B9HPF0 Predicted protein | 1842 | 1e-203 |
| B9IFV8 Predicted protein | 1828 | 4e-202 |
| C5YZ91 Putative uncharacterized protein Sb09g022490 | 1828 | 4e-202 |
| B8AYZ7 Putative uncharacterized protein | 1823 | 2e-201 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G29080.1 ftsh3 (FtsH protease 3); ATP-dependent peptidase/ ATPase | 2012 | 1e-225 |
| AT1G07510.1 ftsh10 (FtsH protease 10); ATP binding / ATPase/ metalloendopeptidase/ nucleoside-triphosphatase/ nucleotide binding / zinc ion binding | 1914 | 3e-214 |
| AT5G15250.1 FTSH6 (FTSH PROTEASE 6); ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion binding | 845 | 2e-090 |
| AT2G30950.1 VAR2 (VARIEGATED 2); ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding | 832 | 7e-089 |
| AT5G42270.1 VAR1 (VARIEGATED 1); ATP-dependent peptidase/ ATPase/ metallopeptidase | 806 | 8e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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