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Information for unigene UN10113
| FASTA Sequence |
| Unigene ID: UN10113 | Length: 954 |
SSR | | GGACAGTTTCCTCAATATCTTCAGATCACAGGCTCTGATAATTTCTCCCGTCCTAAAGAGAGAGAGAGAGAGAGAAGCAGATCTTC
TCATCACGACCCTTGCAATACGAGAGGAGAGAGAGAGATAGAGAGATAGATAGAGAGAGAGAGAGAGAGAGAGAGAATGTCTGGAA
TGGTTGATTCGAGCTCGTGGGGCGCGGCGTTGGTAAGGATCTCGCCGTACACTTTCTCCGCAATCGGAATCGCCATCTCGATCGGC
GTTTCAGTCCTCGGTGCCGCCTGGGGAATTTACATAACGGGAAGTAGTTTGATCGGTGCGGCCATTGAAGCTCCTCGTATCACTTC
CGAGAATCTCATCAGTGTTATCTTTTGTGAAGCTGTTGCTATGTATGGCGTTATTGTTGCCATTATACTGCAAACGAAGTTGGAGA
GTGTTCCTTCTTCAAAGATGTATGACGCTGAGTCTCTTAGAGCTGGATATGCAATCTTCGCATCCGGAATCATTGTTGGATTCGCC
AACCTTGTCTGCGGGTTATGTGTAGGAATCATTGGAAGCAGTTGCGCATTGTCTGATGCTCAGAACTCCACACTCTTTGTGAAGAT
TCTTGTGATTGAGATCTTCGGAAGCGCCCTGGGGTTGTTTGGAGTTATTGTGGGGGATCATTATGTCCGCACAAGCAACATGGCCG
ACCAAATAGATAATAACCGGTCTGAAACTGTTGTGATATATATATCATGAAAGAACATGGCTTCTTGCATATCTTCATTGTTATAT
GGATACTTTCATGTCCAGAAGAAAAAAACATGTGTGAAAGAACTGAGAACCACTTTTTGGATCCCTGTTTATTTTATTTTTGTATT
ATTTAAAACTTTGGAATAAGGCACGTCGGAGAACGTCATCTTCATGTTTGTATTCACGTTGGTTGTTCTCTATTTATCAAAGACAA
GAGTTTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_180132 V-type H+-transporting ATPase 21kDa proteolipid subunit [Arabidopsis thaliana] | 770 | 1e-079 |
| XP_002880688 H+-transporting two-sector ATPase [Arabidopsis lyrata subsp. lyrata] | 770 | 1e-079 |
| NP_194979 ATPase, F0/V0 complex, subunit C protein [Arabidopsis thaliana] | 769 | 2e-079 |
| AAR26002 V-ATPase subunit c'' proteolipid [Xerophyta viscosa] | 733 | 2e-075 |
| NP_001152133 LOC100285771 [Zea mays] | 728 | 9e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| P23968 V-type proton ATPase subunit c'' | 488 | 3e-048 |
| Q2TA24 V-type proton ATPase 21 kDa proteolipid subunit | 466 | 9e-046 |
| Q99437 V-type proton ATPase 21 kDa proteolipid subunit | 466 | 9e-046 |
| Q91V37 V-type proton ATPase 21 kDa proteolipid subunit | 466 | 9e-046 |
| O14046 Probable V-type proton ATPase 20 kDa proteolipid subunit | 461 | 4e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9SLA2 At2g25610 | 770 | 8e-080 |
| Q9SZY7 H+-transporting ATPase-like protein | 769 | 1e-079 |
| Q6S9B3 V-ATPase subunit c'' proteolipid | 733 | 2e-075 |
| B4FZS8 Putative uncharacterized protein | 728 | 6e-075 |
| Q84V02 Vacuolar membrane ATPase subunit c'' | 723 | 2e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G25610.1 H+-transporting two-sector ATPase, C subunit family protein | 770 | 5e-082 |
| AT4G32530.1 vacuolar ATP synthase, putative / V-ATPase, putative | 769 | 6e-082 |
| AT4G32530.2 vacuolar ATP synthase, putative / V-ATPase, putative | 565 | 3e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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