RadishBase

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Information for unigene UN10121

FASTA Sequence

Unigene ID:UN10121

Length: 1247

GGGAGAAAAGAAACCCACTCATAATCTTACCACATCAATTCTCTCAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTACTATT
ACAGAGTCAGACTCCTAAGTTAGGTGAAGAAGAAGAACAATGACGAAAGAAGTTGTTGGAGAGAAGGGATCCTTCTCAGGCAAAGA
TTATCAAGACCCACCCCCTGAGCCTCTGTTCGACGCTACTGAGCTTGGGAAATGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCA
TAGCCACTCTCCTCTTCCTATATGTCACCGTTATGACTGTCATTGGTTACAAGAGCCAGACCGATCCAACCCTTAGTCCAGACCAG
TGTGCAGGTGTTGGAGTCCTCGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTCTACTGCACTGCTGGGATCTCTGG
TGGACACATAAATCCGGCGGTGACGTTTGGGCTGTTGCTGGCAAGAAAAGTTACGTTGTTGAGAGCAGTAATGTACATGGTGGCTC
AGTGCCTTGGTGCCATTTGCGGTGTGGCTTTGGTTAAGTCCTTCCAGTCTTCTTACTACACCCGCTACGGTGGCGGGGCGAACGGT
CTCTCAGATGGTTATAGCGTCGGCACCGGTGTTGCCGCCGAGATCATCGGTACATTCGTCTTAGTCTACACTGTCTTCTCTGCCAC
TGACCCCAAGAGGAGTGCGCGCGACTCTCACGTCCCTGTATTGGCTCCATTGCCAATTGGATTTGCGGTGTTCATAGTTCACTTAG
CTACAATCCCAATCACGGGCACTGGCATTAACCCTGCAAGAAGCCTCGGAGCTGCAATCATCTACAACAAGGACCAAGCTTGGGAC
CATCATTGGATATTTTGGGTGGGTCCGTTTGCGGGTGCAGCCATTGCTGCTTTCTACCATCAGTTTGTGTTGAGGGCTGGTGCGGT
GAAGGCGCTCGGGTCTTTCAGGAGCCAGTCTCGCGTTTAACTTAGATTCTCCCTCACTTATCAAAGAGAGTAGCGAGAAGACAATA
AAAAGCGGCTTTTTATGTAATGTAGATGGTTGGAATCTAGTGACATGTAGTATCTTAGTTCTAGCTTTGGTGAAGAGAGGTTTTGA
GTGTGACTTGTGGGTCAACTTTGAAATGCTACTTCTCTTATATCTATGTCTACTCCTTAGCCTTATGTTGCTCTATGTTTTTACTA
GTTTTCTGAATTCCGCATAATAAACTTTCCACGTATCGAGTGC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
NP_191042 putative aquaporin PIP2-5 [Arabidopsis thaliana]	1436	1e-156
BAB40143 plasma membrane intrinsic protein 2-2 [Pyrus communis]	1276	4e-138
AAC17529 aquaporin 2 [Samanea saman]	1267	4e-137
ABU94631 putative aquaporin PIP2;3 [Phaseolus vulgaris]	1256	8e-136
ABB88840 aquaporin [Stevia rebaudiana]	1252	2e-135

Swiss-Prot top hits (Blast detail)	Score	E value
Q9SV31 Probable aquaporin PIP2-5	1436	4e-158
P43287 Aquaporin PIP2-2	1205	3e-131
P43286 Aquaporin PIP2-1	1200	1e-130
Q8H5N9 Probable aquaporin PIP2-1	1199	1e-130
Q84RL7 Aquaporin PIP2-1	1198	2e-130

TrEMBL top hits (Blast detail)	Score	E value
Q9AVB3 Plasma membrane intrinsic protein 2-2	1276	3e-138
O65357 Aquaporin 2	1267	3e-137
A8SJR3 Putative aquaporin PIP2;3	1256	5e-136
Q2I6J7 Aquaporin (Fragment)	1252	2e-135
Q8W1A6 Aquaporin-like protein	1240	4e-134

Arabidopsis top hits (Blast detail)	Score	E value
AT3G54820.1 PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel	1437	3e-159
AT2G37170.1 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel	1206	2e-132
AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel	1201	7e-132
AT3G53420.2 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel	1201	7e-132
AT2G39010.1 PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E); water channel	1188	2e-130

EST library breakdown for ESTs in the assembly


9	2			22%


12	4			44%


7	1			11%


20	2			22%

Unigene Members