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Information for unigene UN10129

FASTA Sequence
Unigene ID: UN10129Length: 1399 SSR 
CCAAAACATATCATGATTATATTTTCGATACTACAAGTCTAGAAATCGTGCGATACATACACAACAAAAGAAAACTTCAAAAAATC
TTGGTTGGTCGGAGCTGGATCAGGTTCCGTCTAAAAGTAATAAGAAATTGAGACAATAAAGGAAGGAAGGACACATGTAATAAGAA
TCTCGTTTTCGGAATTTCGATTGTTTCAAACAGAAACCAAGACCTTTCTTGCGGCACAAGACTCCACAGATTCTTACCTCACGCAG
TATCGTAGATCTGATGTGGAATCAGAAACGATGACAATTTTGTGCAATAATGGCCGCAAAGGAGAAGAGAAGAGAGAGAGAGAAAA
AAAACAATAGAAGAGAATCCGTGTTATTGCTGTTGCGTGTGGCCTCCATTTTCAATGGTTAGAGGAATAAAGAGATGTTTCTTTCT
CTCTTGCTATCCATTTATTCTTCGCTTAGTGTTTGAAGAGAGAAGACATCGTCACCATCTTCAGAACATTTATTTTTGTGTGCGTA
TAGCTTAAGGTTGCTATTTTGAAAACATTACTTGATTTTCGGAAGACACAAAAAAACATGTAACACAATCAATTAAGGAACCAAGA
TAATGAAATATTTTATGGTTAGGACTACATGTCTGATGTCTCTCATGGTCAGCTTCTACAGTTCATGAGATGGCATTTAAGTTTCT
CAACATCCGATAGTTTCAGAGGCTTCTGCATAAACATTTGAGCTCCACTAGCTAAACATTTGTTGATGCGAGTAGGAATGTTCTCT
GAAGACATTATCACAACAGGGACCTCTTTCAGATATGATGACTCCTTCACCTTCTTTAGTAGCTCGAAGCCTGTCATCCCTGGCAT
GCAATAGTCTGTGATGATTAGATTAACCTTCAAATCATTATTGGCCAGTGTATCAATATGCTGATTTTGATCTCCCAAACCCAAAT
ACTCCAATGCTCTAATCGCATTCTCTGCTGTTGTAACTTTGCAAGAGGAGATCTTGAGCAACTTCTCTACGAGTTTACGGTCAATA
AGATTATCATCCACGGCCAAAACATGAAGCTCTTCATGACCATGATGATGATGATGATGATCATAACCCACATCCATTAAAGACGA
ACAAGAACCACTATTCATATCGTTTGTTCCTTATATGTCAAGTAACTAAGAAAGAAAACAACTTGACAATAAGCTAAGAAGCAAGA
CTGGCTCTGGCATTAATACATACACCCTTCAAGACATATAGCTTTCAATACTCCACCACCTCTAATAAAAACAAATTCAAAAATTA
ATAAGACAATGATACATGAAAAAAGAAAGTGACAGATTCAGAAGAGTTGTGGAATCATGTGAATCCGGTGATGGTATTTATGATGG
TTTTCTTTCTATTATTATCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879884 hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp. lyrata]7173e-073
NP_181599 two-component response regulator ARR16 [Arabidopsis thaliana]7164e-073
NP_001189722 two-component response regulator ARR16 [Arabidopsis thaliana]7049e-072
NP_567037 two-component response regulator ARR17 [Arabidopsis thaliana]6026e-060
XP_002876364 predicted protein [Arabidopsis lyrata subsp. lyrata]5929e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9SHC2 Two-component response regulator ARR167162e-074
Q9FPR6 Two-component response regulator ARR176023e-061
Q7G8V2 Two-component response regulator ARR154213e-040
O82798 Two-component response regulator ARR44186e-040
Q9SB04 Two-component response regulator ARR54186e-040

TrEMBL top hits (Blast detail)Scoree value
B4G294 At2g406707163e-073
B9IQ64 Type-a response regulator5471e-053
B9S4F7 Two-component system sensor histidine kinase/response regulator, putative5433e-053
Q71BZ3 Type-A response regulator4941e-047
C6SX49 Putative uncharacterized protein4879e-047

Arabidopsis top hits (Blast detail)Scoree value
AT2G40670.1 ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16); transcription regulator/ two-component response regulator7171e-075
AT3G56380.1 ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17); transcription regulator/ two-component response regulator6032e-062
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator4212e-041
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator4185e-041
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator4185e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
612  86%
 
71  7%
 
111  7%

Unigene MembersMember information