Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10134

FASTA Sequence
Unigene ID: UN10134Length: 1144 SSRSNP
ATTTCCTTAATACATAGTTGAACCTTCCTTCCTTCCTTTCTCTCTATTGCAGAGTGGTGGTAGGAGGGGTTTCGAATCCTTCTTCT
CCTTGTCACTGTATGTATATGGGCGACGCGAAACCGGGGATCGCGATGGCTAACAGAGATCGGGAGCTTCTGATCCCAGTCGCTCA
CTCCCCCGATGATGATGATCACGATTCTTCTTCTTCTTCTACACCTAAACCCTCTCCTTCCTCTTCCTCCTCTCACCACGCTGGTC
AGGAGACGTTTTACAAGCTGATAAGAAGCTGGGCATCAAAGAAGTTCATGACTGGATGTGTTATCCTGCTTCCAATGGCCATCACT
TTCTATGTGACGTGGTGGTTCATTCATTTCGTTGATGGTTTCTTCTCCCCTATCTATGCTCAACTCGGCATCGACATCTTTGGACT
TGGGTTTATCACCTCTATTACGTTCATCTTCTTGGTCGGAGTGTTCATGTCGTCGTGGCTGGGGACTTCGGTTCTCAACTTGGGAG
AGTGGTTTATCAAGCGCATGCCCTTCGTTCGCCACATCTACAATGCCTCCAAGCAAATCAGTACTGCCATTTCACCAGATCAAAAC
ACTCAGGCTTTCAAAGAAGTCGCCATTATAAGGCATCCACGTATTGGTGAATACGCGATTGGTTTCATCACATCCACCCTTGTTCT
CCAGACTTACACGGATGAAGAGGAGCTTTGCTGTGTGTATGTGCCTACAAATCACCTTTACATCGGGGATGTGTTCCTTGTAAGTA
CAAAGGATGTCATCAGACCAAACCTCTCAGTAAGGGAAGGCATAGAGATCGTAGTGTCAGGAGGAATGTCAATGCCGCAAGTTCTG
TCAACACTTGATAGAATGGCTCCAGAAAGAAGTAGAAGTAGTAGAGTCGAAAGAAGCTGAAGATTAGTCCTTTGCACAAAAAGAAA
AAAAACAAACAGATTCTCAAATCTTTTCTCGTTCAATGTCTTTTTTCTTTTGGATTCAGTTAATTTCACATGTGATGTTCAAGCAT
TAGAAAAGCAATCGTGTTCTATAAGTGGTTTGTTCTCCAGACTAACTCCATCTGTGTCTATATACTAGCTTTTCCTACTCTCAAGT
AATCTGTATGATATAATTCATTTAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002324995 predicted protein [Populus trichocarpa]11123e-119
ACT22583 unknown [Glycine max]11025e-118
XP_002331162 predicted protein [Populus trichocarpa]10981e-117
XP_002284354 PREDICTED: hypothetical protein [Vitis vinifera]10962e-117
XP_002883944 hypothetical protein ARALYDRAFT_480456 [Arabidopsis lyrata subsp. lyrata]10919e-117

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9ILN4 Predicted protein11122e-119
C5WLV2 Putative uncharacterized protein11023e-118
B9N7C0 Predicted protein10981e-117
Q0WL91 Putative uncharacterized protein At2g2012010853e-116
Q9SL69 Expressed protein10853e-116

Arabidopsis top hits (Blast detail)Scoree value
AT2G20120.1 COV1 (CONTINUOUS VASCULAR RING)10833e-118
AT2G20130.1 LCV1 (LIKE COV 1)10573e-115
AT2G18460.2 LCV3 (like cov 3)9265e-100
AT2G18460.1 LCV3 (like cov 3)8801e-094
AT1G43130.1 LCV2 (LIKE COV 2)8423e-090

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  9%
 
84  36%
 
114  36%
 
92  18%

Unigene MembersMember information