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Information for unigene UN10136
| FASTA Sequence |
| Unigene ID: UN10136 | Length: 758 |
| SNP | GGACTCTTCCAAAAACAATACACAATGAAAATGCTGATGTACATTGTTGTGTTTGTTATTCTCTTCAATGGTTGCATGGCCAACAA
AGTAGCAAATTCTCTGATTCAAAAATCTTGCAAAAACGTTTCAGAATTTTTATTTGTGGAACCTATTCCACATTTCGAAAAGGATT
GCATTGCATCTCTCAAAGAGAATCCGGAGAGCCAGAAAGCGAGAAATATTGATGATCTGATCTTGGTAGGAACGAATAACGCCATA
TCATACTTAAAAAACGTGGACAGAACTGTGGAGAAGATTATAAAAGAGAAGAAATATAAGAGTAGCCTTAGTAAGAAGTTGTTGGA
AGAGTGCCTTAAGCTTTACTCCAAGGGCGCTCACATGTTAAACTCAGGTTTGAACAACCTCAAAAAGGGGAACTTCACGAAGGCTC
AATTTGATATTGGTGATGCAGTTGAAGCACCAATATTTTGCGAGTTGAAATTCAACGGCGACAATCAACAGATATCTCCCGTCAAA
AAAGAGAATAATCTTCTCTTAACAATGATCAACATTCCTCGGGTGTTTATTATGATATATCATCATTAGTCTAGTGGAGATGATAG
GCCAGATTTTAAAAAGAGGTGTTAAGTGACTTTTACTGAAAAAATTACGAAAATATAAATAGTTCTCATTAATAATTTTGTTTTGT
ATGTTAAATTCTTCTTTGGTTGATTATATAATAAAATGATATTTTTTGGGTCAAAGGAAATAACTTGTAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894595 predicted protein [Arabidopsis lyrata subsp. lyrata] | 521 | 6e-051 |
| NP_175863 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana] | 506 | 3e-049 |
| AAC64879 Similar to gb|X80472 STS15 gene from Solanum tuberosum [Arabidopsis thaliana] | 496 | 5e-048 |
| NP_199509 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana] | 451 | 8e-043 |
| NP_199510 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana] | 431 | 2e-040 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZVM8 T22H22.6 protein | 496 | 3e-048 |
| Q9FJR3 Genomic DNA, chromosome 5, P1 clone:MQD22 | 451 | 5e-043 |
| Q9FJR2 Genomic DNA, chromosome 5, P1 clone:MQD22 | 431 | 1e-040 |
| Q8LFU4 Putative uncharacterized protein | 225 | 8e-017 |
| Q7XYW4 Seed specific protein Bn15D12A (Fragment) | 221 | 2e-016 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G54620.1 invertase/pectin methylesterase inhibitor family protein | 506 | 1e-051 |
| AT5G46980.1 invertase/pectin methylesterase inhibitor family protein | 451 | 3e-045 |
| AT5G46990.1 invertase/pectin methylesterase inhibitor family protein | 431 | 7e-043 |
| AT5G46940.1 invertase/pectin methylesterase inhibitor family protein | 220 | 2e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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