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Information for unigene UN10142

FASTA Sequence
Unigene ID: UN10142Length: 2100 SSR 
GCAAACATCATTGAATATGTATGAACATTGTACAATGAACTTATTAAGACTTTTACCTTCATTTGTGCAATTTCCAACTGAAGAAA
AAAGGAAGTAAAGAACACAAAACTTATTAGCCAAATGACAACCTCCTCTTTCAAAGACTTCTCGGAAGATCTTAGAGTTTGGATGT
AGTCAATCACAAATTCAGGTTCAGGAGATTTTCTAGCAGGTACAAAGGACTCTTTCTTAAATGCTGAGTTCCACTTATCAATCTCT
GCTTTTGCTGATTCAAGCTCACTTTGACATGAAGCAAGCTCATCTTTACAGCTCTGAAGACTGCCACAGAGAGAGACAAAGCAAGC
AGGTTAAAGTGTATACATCAAAGCAAACACTCTCTTTTTCATCCACTTTCGTGCAAGTGCAACACCTTTTTCATCCACTTTCGTGC
AAGTGCAACAGCTGCAACACCTTCTCAGATTCAATAATCACAGAGAGAGCAAACAAAACGGTCTGTTTCCGTTTTGTCGAGGAGCC
TCCGAGAGAGAGAGAATCGTAAGCATATACATTATGCACTTCTGATTTGAGAACACGCCAAAAGCTTACAATACAATACATATATT
GTAAGCTTATCTGCACTTATCTGAAAGTGAGCCACTCTCGCCTCATTCCCCCAAACATATACATCAATTTAACTTTCATCTGGCTT
CATTCATTGCTCCAACAATACATATATTATCTAAAATGTATTAAGACTGAGCTGATCTGTTCATGGTGGCAGAGATAGTATAACAG
AAAGAAACGGTGGCGGAAATCGTTGGCGACCATTGGTGCGGCCTGTGGCTTGGCTTGAGAAACGGTGGCGATATAGTCGAAATTGG
GGACTTGTTTGCCGGCGGATTCGAACTGAGAGGTGAGCGGCGTCGGATTGATTTCGAGGAGAGACCATCGGGAGAGATCACGAGAG
AGAGGAGTCGGCGTCGTCGAGGAAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTCAGAGATCTTTTGAGAATGG
CAACTTCAGGAGAATCATCCTCAGAGACGATGGAAGACTCACACTCACCGGCGGCGATTCCACAATCTCCGCCACCGGCTCCTCTC
CTCACTTCGATTCCAAGCGCTAAGATCGCAACGACGACGGTTGAAAACGCAGCTTCCTGGATCGAGGACGCGATGCGTCAGGCGCT
CGTGTACCAGAACACGATCCTGGAGACGCTGGATTCCAAAATCGACGCATCGAAGTCTCGATTGAGCCAAATTCGAGATACTTCAA
TCGCTCACACCAGCCAAACAATCGATTCTATTAGAGAGATTGCTTCTGAGTATAACGTATACGAGCATATGGTGTTTGCGAAGATC
AAAGATGGTGTGAACGTTGCTGCATCTCATCCTCTTATATCAGGAGGTTTAGCTTTTGGTGTTGGGATCTTTGCTTTGAAAAAGAC
GAGAAGATTTGTGTACTACAATGCTGTACGCATGTTTTCAAGCGAAGAGGCGTTGCTTTCTAGAGCGGATCTTAGAGTAAAAGAGC
TGAGACAATCGCTGGATCGTCTTACAGCCGAAAGTGAAAAGTTAGAGCGAGTTGCAACTGTGGCAGAAGATGAGCTGATCAGAGGA
AGGATGAAACTCAGACAAGCAGGCAAACAGATACGAGGTGTTGTTAACTCAGCTTATAAGATTGAAAAGCAAGCAGCAGGTTTAAA
AGATGTACTTAAAGAATTACCCACGAGAGAAGCTTCTCGGTTCCGTTCTCAAATATCGAACCGTGCTTCTGAGGTAAAGCAAGAGA
GAAAGGCTTTGACAAAGGAAGTGAACAAGATCAGCAACTATGGTATCTCCGTATGAGGAAAATCAAAACCCATTTTTCTAGTTACG
GATTTGAATACACTCTTGAGTTCTTAGATGATGGAGCAATATTATATACACTATTAATAATGTCTAAAACATGATTAAGACTAATC
TTTTTGTTTGGTTTCAAATGCGAAAGATGCAATCTCATGTTGTCTTTTGTTTTCGAGTGCTTTGGTTCTTTGGCAATTAGTTTAGC
AATACAAATTGATGTTTGCAACCATTTGGTGCGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566034 uncharacterized protein [Arabidopsis thaliana]10779e-115
XP_002881994 hypothetical protein ARALYDRAFT_903941 [Arabidopsis lyrata subsp. lyrata]10742e-114
XP_002511643 conserved hypothetical protein [Ricinus communis]7703e-079
XP_002302514 predicted protein [Populus trichocarpa]7614e-078
XP_002277999 PREDICTED: hypothetical protein [Vitis vinifera]6871e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZSZ8 FKBP12-interacting protein of 37 kDa2745e-023

TrEMBL top hits (Blast detail)Scoree value
Q94AZ5 At2g45060/T14P1.1310776e-115
B9RD54 Putative uncharacterized protein7702e-079
B9GPB2 Predicted protein7613e-078
B9MUZ0 Predicted protein (Fragment)6798e-069
A9SYE5 Predicted protein4153e-038

Arabidopsis top hits (Blast detail)Scoree value
AT2G45060.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26410.1); Has 50 Blast hits to 50 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).10782e-117
AT4G26410.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G45060.1); Has 47 Blast hits to 47 proteins in 12 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 40; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink).3165e-029
AT3G54170.1 ATFIP37 (ARABIDOPSIS THALIANA FKBP12 INTERACTING PROTEIN 37); protein binding2744e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  18%
 
66  55%
 
181  9%
 
92  18%

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