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Information for unigene UN10149
| FASTA Sequence |
| Unigene ID: UN10149 | Length: 1198 |
| SNP | ATGTAACATGAGTTTTCTTAATCTTAGGCAGACAAAATATGAAAGACACAACAAAGAGAGACGTAATAGTTTTGGAGGAAGCTTTT
GCTGTGAAGTGTTACAATAACAAAAGTAAGAACATAACTATAACAGAAAGAACAAGCAAAATACTTTGTAACCCCTATATATAGAA
GATAAACGTATCAGTTAAAGAATGCTCTGATTGTCTGAAACACATCGATTCTGAGGTTACCTCTTATCGATATTTTTCAGTACTTC
GGGTTTTGTTTTTTTTTTTGTCCATCTCTGTGTCTCTCTCTAGAGACCAAAATTGCACATCTGCACAAACTCCATTTCGTTATCCA
CGTATTTAGTCCAGAGAGACTTGTATTGGTTCATAGCAATGTCTAGCCATGGTTTCATGTTTCCATTGTAATGTATCACTGCTGCC
TTCTTGATCTCATCCATGCTCACTCCCGGGTTGTAGCCTAACCCAAGCACATGCCAGGACTTGTCCAGTGATTTCGTCTTTGAATA
GAATGTCATCAGTCCCGGAGGCAGAGTGCCCAATTCCCAGAGACTTCTGTCTTCATTCAAGTTCTGCCAGTAATGGTATTGATCGG
TGCATTTCTCGCGTCTCCAAGCGTTGAGATCAAATATATTCATCCCAAAGGCCCAAGCACAAGCATTGGGGTTAAACCTCTCTTTG
ATCAGAGGATGAGTGAAATTCAGGTACTGACCATACCGATGAAAAGAGCCAAAGCACGTCTCAACAGCTCCATTCACCTTTCCATC
CAAGTTAATCTTCCATAAACCAGTCACGTCTTTCTGCACTACAACATCGTCGTCCAAGAACAAGATCTTGTTCAGCTTCGGGTACA
TCTCAGGCAAGTAAAACCTGAGATGGTTCAGCATGGAGAGATACTTGGGGTTCTTGAACTTGATGTTAGTCGCGTTCTCCGCCTGA
TTCTCAAAGTAGAACTTGTGCAACTTGGCAGACTCCAGCTGCTTCATGACCGGCGCATAAGAAGAGTTCAAGAACTTGAACTCCTC
CACAGATTTGATCTCAATATGGGCACCACGGTCCAAAGGACGCATCTTAAACCACACCTTCATGGCTGCAAGATTCATCCGATCGG
TCACCACATGAAAAACATGCTTCCACGGCTCCTCAGCGTTCATCACAACCGATCTCACCACAACCGACACAGCAATCACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882224 hypothetical protein ARALYDRAFT_477468 [Arabidopsis lyrata subsp. lyrata] | 1545 | 2e-169 |
| NP_566170 alpha-1,4-galacturonosyltransferase [Arabidopsis thaliana] | 1541 | 7e-169 |
| ABD96860 hypothetical protein [Cleome spinosa] | 1452 | 1e-158 |
| XP_002329246 predicted protein [Populus trichocarpa] | 1434 | 2e-156 |
| XP_002530802 Glycosyltransferase QUASIMODO1, putative [Ricinus communis] | 1419 | 9e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FWA4 Probable galacturonosyltransferase 9 | 1557 | 4e-172 |
| Q9LSG3 Galacturonosyltransferase 8 | 1326 | 2e-145 |
| Q9LE59 Alpha-1,4-galacturonosyltransferase 1 | 1049 | 3e-113 |
| Q93ZX7 Probable galacturonosyltransferase 4 | 1027 | 1e-110 |
| Q0WQD2 Probable galacturonosyltransferase 3 | 997 | 3e-107 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1KUX6 Putative uncharacterized protein | 1452 | 9e-159 |
| B9N1W2 Predicted protein (Fragment) | 1434 | 1e-156 |
| B9SXT3 Glycosyltransferase QUASIMODO1, putative | 1419 | 6e-155 |
| B9NC17 Glycosyltransferase | 1417 | 1e-154 |
| A9P857 Putative uncharacterized protein | 1322 | 1e-143 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G02350.1 GAUT9 (Galacturonosyltransferase 9); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 1558 | 3e-173 |
| AT3G25140.1 QUA1 (QUASIMODO 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups | 1327 | 2e-146 |
| AT3G61130.1 GAUT1 (GALACTURONOSYLTRANSFERASE 1); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1049 | 3e-114 |
| AT5G47780.1 GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 1027 | 1e-111 |
| AT4G38270.1 GAUT3 (Galacturonosyltransferase 3); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups | 997 | 3e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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