Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10151

FASTA Sequence
Unigene ID: UN10151Length: 1148 SSR 
TTTTTATTAGGGTTCCTTTCCTTCCTTCGTTCCCAGATTTTGATTTTAACCGGAAATATAAAGTCACTTTCCTCCGGCGATTGTGA
GGCTAATTGATCCTCCGGCGAGGTTCGATAAAAAATGGAGGTAATCACCCATCCAACACCTCGAACTGTCGAAGAGGTCTTTACTG
ACTTCAGAGGTCGTCGTGCTGGTCTTATCAAGGCTCTCACTACCGATATGGTGAAGTTTTACCAAACGTGCGATCCTGAGAAAGAG
AACTTGTGCCTCTACGGACTTCCAAACGAGACATGGGAGGTGAATCTTCCCGTCGACGAAGTTCCTCCCGAGCTTCCTGCGCCTGC
TCTAGGCATCAACTTCGCTAGAGACGGGATGCAAGAAAAGGACTGGGTGTCTCTGGTCGCTGTTCACAGTGATTCCTGGCTGCTCA
CTGTCGCGTTCTACTTTGGTGCTCGTTTTGGGTTTGGTAAGAATGAGAGGAAGAAGCTCTTCCAGATGATAAACGAGCTCCCAACC
ATTTTCGAGATTGTGACAGGCAATGCAAAGCAATCCAAGGATCTATCTGCCAACAACAACAACAGTAGCAAAAGCAAATCCAACGG
CTTGAAGGTTCCAAAGATGTCATCTCCACCGCCGAAAGAAGAAGACGAGAGTGAGGACGAGGACGAAGACGACGAACAAGGTGCGG
TCTGTGGCGCTTGTGGAGACAGTGACGGTACAGACGAGTTCTGGATCTGCTGCGACGCGTGTGAGAAATGGTTCCATGGGAAATGT
GTGTAGATAACACCTGCAAAAGCGGAACACATCAAGCATTACAAATGCCCAACTTGCAGTAACAAGAGAGCCAGGCCTTGATGATG
CCTAAGTGAGCAAAGGTAAAAGAGTTAGGAGGAAGCTGTGAAAGGAGGAGAAGTTCCCAGTTTATTGAACGAAAAGGCCAAAGATA
AATGGGGTTTTAGAAGATGTAAGAAGGTTTAAAAAAACACGTTTGCTTGCTTAGTCTTTGTTTATGGATTCAGACTATTTACTATT
GATGTGATGTTTTTCTTTGGATGCTTTGTTGTTGTTGTTGTTAATGTCAATGCTACTACTGATTTGGCCCTGCTTAAGTCTGTTTA
AAGTATCCTAGACTCCTGCTTAAATATGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001189502 protein alfin-like 6 [Arabidopsis thaliana]12092e-130
NP_178351 protein alfin-like 6 [Arabidopsis thaliana]11894e-128
AAM65374 putative PHD-type zinc finger protein [Arabidopsis thaliana]11894e-128
XP_002875129 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]11796e-127
XP_002892811 PHD finger family protein [Arabidopsis lyrata subsp. lyrata]10962e-117

Swiss-Prot top hits (Blast detail)Scoree value
O81488 PHD finger protein At5g262109087e-097
Q9W0T1 Nucleosome-remodeling factor subunit NURF3011408e-008

TrEMBL top hits (Blast detail)Scoree value
Q8LAH0 Putative PHD-type zinc finger protein11893e-128
Q8S8M9 Putative PHD-type zinc finger protein11893e-128
Q8LA16 At1g1451010952e-117
Q06A75 PHD510891e-116
C9EID2 Putative alfin-like transcription factor10083e-107

Arabidopsis top hits (Blast detail)Scoree value
AT2G02470.1 AL6 (ALFIN-LIKE 6); DNA binding / methylated histone residue binding11901e-130
AT1G14510.1 AL7 (ALFIN-LIKE 7); DNA binding / methylated histone residue binding10951e-119
AT3G42790.1 AL3 (ALFIN-LIKE 3); DNA binding / methylated histone residue binding9427e-102
AT5G20510.1 AL5 (ALFIN-LIKE 5); DNA binding / methylated histone residue binding9292e-100
AT5G26210.1 AL4 (ALFIN-LIKE 4); DNA binding / methylated histone residue binding9086e-098

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  83%
 
61  17%

Unigene MembersMember information