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Information for unigene UN10154

FASTA Sequence
Unigene ID: UN10154Length: 1138 SSR 
GGGCCTCCTCGTCAAGTGTTGATCTTTAGACGAGTTATGGGGAAAGAGAGCAGCAAAGCCTCGAGCTTGAAAGCAGAGCAGAAAGT
TATTGTTCTCCGTTCGGTCGCTCAGTACTTGGAGCGATGTGGGTTTTCTAAATGCTTCAAGAAGCTTCTCTCCGAAGCTGAAATCG
AGAAGAAGGAGTTGAACAGTAGCTTACCGGATTTAGAGGAAGTTTTCTGCGATTTTTTTAACAAGAGCCATGTTGAAGAATCTGGT
GATGATAATGAGGATGGGAAGAAGAAGAAGAAAGCAGCAAGTGTAGATGAGAATGCATCTGTTGATCACCAAAAGGACGAGAAGAA
AGATAAGAAGAAGAAGAAAAAGAAGGAACCAGAACTGGAGGTAACTAAGGAGGAGGAGGAGGAGAAGGTCAAAGAGACTGATGCTG
AGATTGAAGACGGACTGAAAGAGAAAAAGAAGAAGAAGAAGAAGAAAACCAAGTCTGAGTCTTTGGTTGAAGATGAGGATAAGGAG
AAATCCTCCAAGAAAAGGAAAAGATCAGAGCCTGAAGAGACTAAAGAAGAGACCGAGGAGGAGGATGATGATGAGGGATCAAAACG
GAGGAAGAAGGAAGAGAATGTAGTGGAAGAAACGCCTGTTAAGCAGCAGGCTGATGATGTTCAGGAAAACGGTAACGTTGAGAAAA
GCGAAAAGAAATCAGGAAAAGGCCTTTCTAACTCTAAAGAGCCGAAGAAACCGTTTCAGAGAGTGAACGTTGAAGAGGTTGTCTTC
ACTGACGAGAGGCTAAAAGATAACTCTTACTGGGCAAAGGATGGTGCTGATTCGGGTTATGGTGCTAAAGCTCAAGAGGTTCTAGG
TCAAGTCAGAGGAAGGGGTTTCCGACATGAGAAGACGAAGAAGAAACGTGGTAGCTACAGAGGAGGAGAGATCGATCTTCAGTCAC
ATTCGGTTAAGTTTGAGTACTCAGACGATGAATGATGATCATTGATGAGCAATACACTTGTCTTTATCTTCATCTTTGTTTCTCTT
TTTAAATTATTACCCGCCATCTCTTTCTTTTGCTCTGCTTATCTCAAAATGTAAAACTATTCGGATCTAATTAACCCGGAACTGGG
TTCAAGTTTTGCCTGTGTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]7405e-076
NP_200522 uncharacterized protein [Arabidopsis thaliana]7217e-074
AAM61154 unknown [Arabidopsis thaliana]7217e-074
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]6151e-061
XP_002309003 predicted protein [Populus trichocarpa]5012e-048

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12842e-024
Q14978 Nucleolar and coiled-body phosphoprotein 12383e-019
Q55FI4 Nucleolar protein 582204e-017
P36044 Protein MNN42123e-016
P54696 Myosin-H heavy chain2052e-015

TrEMBL top hits (Blast detail)Scoree value
Q8LFX8 Putative uncharacterized protein7215e-074
Q9LU74 AT5g57120/MUL3_67215e-074
Q93WC7 AT5g57120/MUL3_66151e-061
B9HAX3 Predicted protein5012e-048
B9IN49 Predicted protein4813e-046

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).9686e-105
AT1G56660.1 unknown protein2275e-019
AT3G28770.1 unknown protein2043e-016
AT2G22795.1 unknown protein1891e-014
AT4G37820.1 unknown protein1891e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  40%
 
93  30%
 
111  10%
 
62  20%

Unigene MembersMember information