Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10166

FASTA Sequence
Unigene ID: UN10166Length: 1387 SSR 
GGGAGAGAGAGAGACTCGCCGCTTTTACTTTTATTTTGTTTTGTTGGTCTGTGAAGGTAAAGCAGCAGTAAGCACATATATCTCGA
GCGGCACAAAGGGCAACGGCTAGTTTACTCGGCGTCGAAAGAGGAAGAAGATCGATGGATTACGGAGACGATCGTAGCGCATCATG
GAATTGGCAAGTTCAAAACTATGACCACCAGCCGCACTCTACTTTCTCTGATGTTACGATGACGGAAGTCACATTGAACCAAGAAG
ATCACTCATACATGTTTGATGATCACTCCACCCCTGTCAAGGCCTGTACCGAGTTGGGTTATCATGTCACAACTGATGAAACGACC
AAGAAGCTGGAAGTGCAAAGTGAGACACGCTCTGCTGTAAAGAGGCGTCGGATGTTACTATTCGATGATCGGCCTATGGAAACATC
CCTTTTCAGCAGTGAGAACTTCTCCTCAATCTTAAAATCAAGCGCTAGAGAGGAAACATTTGATGAGCTTTTGCCTGAGGGATCTG
AGCTTATAGAAGGGTTTTCAGCGGATGCTTCTGCCTCAAGCTTGGACTTGGATGGACTTGATCTGTATGCTGAAGAGTGGTACGCT
GATTGCTTAAATGATGCTGAGGCTCCAATCCTTCCTGATGACTTAAGCTTTGGTTCCCCTGATGTTCAAGTAGATATTTCAGAGTA
TCTAAACGTGCCACCAGAACCAGAAGCAAGGGAAGTTAGGCGACCTATGACTCGATCTTCTCCAAATGTTATCTTCAAGGTAGGAA
ATCATTTGCAAGGCCGGTTCCAAGGCTACCATCTTCAATCATATATCCGTTTGCATTCATCAAACCATGTGGGGTTCCCGGCGACA
TGACTCTCAAGGACATCAACCAGAAAATCCGAACACCAGCAGCAAAACCAAAGGAAGACAAATTAGAGCCGCCAGTGATCCAAACT
TCAGCATTCTCTGGGAAACCCGTTGTTGGGAAGACTAAGATCCGCACAGAAGGAGGCAAAGGAAGCATCACAATCATGAGGACGAG
AGGCTAAGCTATAAGTTGAGAACTTTAAGTAGAAAGAGTTTAAGGTTTTTCATTCACTGCTAAAACTCTATAAACCTTTTTGCCTT
ATTCTCAGAGGCCCTTTAAATCTATATTTACCGGATATAGCTCCAGTGAAGAAGCTTTAGGTAAGTACAGCGGCTAATACTCTTGT
CATGAATCATGTTCTTGTTTCGTTTTGGTATCTGTGGTAAGAAAGTGAAATCAAGGAGCTGTAAGCCAATGTGTTGGGATATTTTT
TTTTGTGTAAAGTTCTTATTTCTTAATGTGGCTAAAAACTGAAATGCCAAAACTCATGAGGTTATGTCTCTCAAGTATAATCTGAG
TGGATAACTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001154770 protein XRI1 [Arabidopsis thaliana]8884e-093
NP_199683 protein XRI1 [Arabidopsis thaliana]7666e-079
XP_002863916 hypothetical protein ARALYDRAFT_494937 [Arabidopsis lyrata subsp. lyrata]7641e-078
BAB09425 unnamed protein product [Arabidopsis thaliana]7603e-078
XP_002272402 PREDICTED: hypothetical protein, partial [Vitis vinifera]3581e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q6NLW5 Protein XRI18882e-094

TrEMBL top hits (Blast detail)Scoree value
B9S511 Putative uncharacterized protein3292e-028
A5B5D7 Putative uncharacterized protein3184e-027
B9GQJ6 Predicted protein (Fragment)3042e-025
C6TMG7 Putative uncharacterized protein2602e-020
C5YEQ4 Putative uncharacterized protein Sb06g0134702422e-018

Arabidopsis top hits (Blast detail)Scoree value
AT5G48720.2 XRI1 (X-RAY INDUCED TRANSCRIPT 1)8882e-095
AT5G48720.1 XRI1 (X-RAY INDUCED TRANSCRIPT 1)7662e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
122  67%

Unigene MembersMember information