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Information for unigene UN10178
| FASTA Sequence |
| Unigene ID: UN10178 | Length: 874 |
SSR | SNP | CTTTTCGAAATAAATCTCTAATTTTTAATTCAGATTTTGAGTTATAAGCAGCAGACAACTGAAATAAAAGCAGAATGGTAGTATCT
TTTATCAAGTGGCTAAGATAGTCGTTTAAACACAAAAGTCTTCACGCACTAGATTTAGCTCACATCAATGGCTGATGAGATGGAGA
AAAACTACATGAAAGTTGAGTTACAGAGGAAGCTCACCACTGTCGACAATCACAACTTTACTCTTAGGAGTTCCACTCTGATTACC
CTCAGCTTCGACTTTGTACACCACGTCCATTCCCGACACGACCTTCCCGAACACTACGTGTCTCCCGTCCAACCAGCTTGTTGTTA
CTGTTGTGATGAAAAACTGAGATCCGTTGGTGTCTTGGCCAGCGTTTGCCATAGATAGAAGCCCTGGACCAGTATGCTTGAGTTTG
AAGTTCTCATCAGGAAACGTCTCACCATAGATAGACTCTCCTCCCATACCATTGCCATGGGTGAAATCGCCTGCCTGGAGCATAAA
GCTTGGTATGACCCTATGAAACGAGCTCCCCTTGTAATGTAGAGCCTTCCCTTTCTTACCTATTCCCTTTTCCCCTGTGCACAAAG
CTCGAAAATTCTCTGCAGTTTTAGGGACTGTCTTTTCATATAGACCCATGACAATACGGCCAGCTTCTTTCCCATCAATCTCAACA
TCGAAAAAAACCTTGTGTGTGATCTCCTTTAAGTTCTCCTTTGACTTCTTGGCCTGAATCGCGCTTAGGGTTCCGAGAAGAAGAAG
ACTACACAGAAGCAGCGTCACTGAGCTCGCCATCTCGCACTGTTCAGCAAAGGGTTTGTTTCTCTCTCTCTCTCTCTCTCTGTATC
CGCCCTGCGCATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864586 hypothetical protein ARALYDRAFT_495994 [Arabidopsis lyrata subsp. lyrata] | 992 | 2e-105 |
| NP_200679 Peptidyl-prolyl cis-trans isomerase CYP20-1 [Arabidopsis thaliana] | 985 | 1e-104 |
| ACU13170 unknown [Glycine max] | 921 | 3e-097 |
| AEK80448 peptidyl-prolyl cis-trans isomerase [Carica papaya] | 891 | 9e-094 |
| XP_002277763 PREDICTED: hypothetical protein [Vitis vinifera] | 875 | 7e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 985 | 5e-106 |
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 861 | 1e-091 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 672 | 1e-069 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 669 | 2e-069 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 648 | 6e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SV97 Peptidyl-prolyl cis-trans isomerase | 921 | 2e-097 |
| A5C2G6 Peptidyl-prolyl cis-trans isomerase | 874 | 6e-092 |
| B9GIH7 Peptidyl-prolyl cis-trans isomerase | 873 | 8e-092 |
| A9PAQ9 Peptidyl-prolyl cis-trans isomerase | 870 | 2e-091 |
| B9SI28 Peptidyl-prolyl cis-trans isomerase | 868 | 3e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 986 | 4e-107 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 862 | 9e-093 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 693 | 4e-073 |
| AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase | 625 | 3e-065 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 621 | 8e-065 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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