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Information for unigene UN10210

FASTA Sequence
Unigene ID: UN10210Length: 944 SSR 
CTCAGGCAAGAACATCGATTAATTTATAGAACCAACAGAAGTACATCACAAGAGCATTTAACCAATCAACCTAAAGCAATCTCTCA
TATTCGAACCACTTTTGAACACATAACCCGGTCGTTTACCACTAAACCAAGTGGTTCCACTCTGTTATTATTAGTTTGAGCAGCAT
CCACCTTTCTTCACAGCAGAAACATCTTTACCAAGATCGATCTTGTCTCCTTTCGACGGAACATTAGCGGATTCGCTCGCAGCTTC
CATTGCCTTTCTGCTCACAACGCAGTGAATCTGAGTGAGGACTTCCGCGAAAGCGTTCTCAACATTGGTAGAGTCGAGAGCCGAGG
TTTCCATGAAGTAAAGAGACTCTTTCTCAGCGAATGACTTGGCATCGTCTGTCTGAACAGCCACGAGGTGGCGGAGATCAGATTTG
TTCCCCACGAGCATCACTACGATGTTTGGATCGGTGTGGTTTCTGAGCTCTTTGAGCCACGTCTCCACGTTTTCGAATGTGGAGTG
TCGCGTTACATCGTAGACGAGAAGCGCTCCCACGGCTCCTCGGTAGTATGCGCTAGTGATGGCTCGGTACCTTTCTTGACCAGCAG
TATCCCAAATCTGGGCTTTGATGACTTTATCGTCAACATTCAAGCTCCTAGTCGCGAACTCGACTCCGATGGTTGATTTGGACTCG
AGGCTGAACTCGTTCTTGGTGAATCGTGAAAGCAGATTGGACTTCCCAACACCAGAGTCACCGATGAGAACAACCTTGAAAAGGTA
ATCGTATTCATCGTCTGCTTTGTAACCCGCCATTGAGAGAGAGAGAGAGAGAGAGATCAAAATGTTTTTTTGCGCTTTTATTTAAA
AAGCTGAAAAACCCTAACGAGATTTACGCCAGGATTTTGTTCTCTAGATCTTTTCGACTTGTGCACACAGAGAGAGGAACGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199387 Ras-related protein RABA1c [Arabidopsis thaliana]10657e-114
AAM60865 Rab-type small GTP-binding protein-like [Arabidopsis thaliana]10541e-112
NP_193615 RAB GTPase homolog A1D [Arabidopsis thaliana]9644e-102
XP_002867975 hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp. lyrata]9644e-102
ACD56628 putative GTP-binding protein [Gossypium raimondii]9591e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q9FK68 Ras-related protein RABA1c10653e-115
P40393 Ras-related protein RIC29391e-100
P28185 Ras-related protein RABA1a8862e-094
Q01111 Ras-related protein YPT38809e-094
Q39222 Ras-related protein RABA1b8763e-093

TrEMBL top hits (Blast detail)Scoree value
Q9SN35 Putative ras-related GTP binding protein9643e-102
B2ZAR1 Putative GTP-binding protein9591e-101
Q6DXU0 Putative GTP-binding protein9581e-101
B2ZAS4 Putative GTP-binding protein9553e-101
Q6DXS7 Putative GTP-binding protein9553e-101

Arabidopsis top hits (Blast detail)Scoree value
AT5G45750.1 AtRABA1c (Arabidopsis Rab GTPase homolog A1c); GTP binding10662e-116
AT4G18800.1 ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D); GTP binding9685e-105
AT1G06400.1 ARA-2; GTP binding8871e-095
AT1G16920.1 ATRABA1B (ARABIDOPSIS RAB GTPASE HOMOLOG A1B); GTP binding8772e-094
AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding8735e-094

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
75  83%
 
81  17%

Unigene MembersMember information