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Information for unigene UN10222
| FASTA Sequence |
| Unigene ID: UN10222 | Length: 977 |
| SNP | GCAGACCAAGAAGGAAACAAACCATGACCAAATGTTTCTCAACCAGTTTTTTTACACTGTTACACTCAAAAACCAATGGATCTGTC
TTAGCATCCTGAGTTTTTTTTTTTTTTCAAACATACATGTCGGTTTTTCTTTGTTGAACAGTTATTTTACTTAAAAAAGGTCTTCA
CAAGGATTCACGGGAAGCACTTCATTCTCTGTCTTTCCACCTCAAGAAAAGATGCTTCAAGCCTTCTTTTCAGGACAGATCTCTCC
TCTTCACAGCTCTCCATCTTAGTGTCGTAATAGTATGTCGACAAAATGGTGATCCGCTCCGTCGGCATTACAAAGATCCCTTCACG
GCGAGTGGGAACTTCTTCTAACTTCCTCAATGTTTCATCTCCTTTAGTCACTTTACCGAACACAGCGTACTTGCCATCAAGATGAG
GAGCATCACCAAGAAGCATCGAGAATGAAGATCCACCACTGTTTGGATCATCATGTCTTCCCATGGAAAGAATGCCTCTGACATGC
TTGACATCACTGAACTCTCCGAGAATAGTCTTGTAAGCTATTTTCTTTTGCTCCTCATTCATCGGAGCTGATCTTCCATTCGGCAC
ATCTGCAACTTGAGCAACGAAACCTTTATCCACCCTGAAGAAATGATTAGTGTTGTAGCCTCCTAAACGAACGAGCTTGAAGATAT
GATCCACCGTTACTGGCGCAACCGTTGGATAGAATCCAAATTCGATATCCCCGTAACTAGTCTGGAAGACGACACGAGCTGAACCG
AGTTCCGGTTCGTAAGAGATTGTTTTGACTACGTATGCTACAAACGCCAAAGTGAAGATCGAGATTCTCGAGTTTCTCATTTCCGG
CGCCGATTTGATCAAAGTCAACACTGGCAGTGATACTCGGAAGGGGGGGGGACGATGACCGGAGAGTCCGTAGTGAAAGATATTAT
TTTAATTGATTTGGGCCTATTGTTTGTTCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893370 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata] | 982 | 3e-104 |
| NP_564267 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 972 | 5e-103 |
| ACJ86078 unknown [Medicago truncatula] | 948 | 3e-100 |
| ACU20628 unknown [Glycine max] | 907 | 2e-095 |
| XP_002276441 PREDICTED: hypothetical protein [Vitis vinifera] | 897 | 2e-094 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9H2H8 Peptidyl-prolyl cis-trans isomerase-like 3 | 186 | 3e-013 |
| Q5ZLV2 Peptidyl-prolyl cis-trans isomerase-like 3 | 183 | 6e-013 |
| Q9D6L8 Peptidyl-prolyl cis-trans isomerase-like 3 | 183 | 6e-013 |
| Q5KAW8 Peptidyl-prolyl cis-trans isomerase-like 2 | 182 | 8e-013 |
| Q812D3 Peptidyl-prolyl cis-trans isomerase-like 3 | 182 | 8e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDR3 Putative uncharacterized protein | 972 | 3e-103 |
| B7FMU5 Putative uncharacterized protein | 948 | 2e-100 |
| C6TFM6 Putative uncharacterized protein | 907 | 1e-095 |
| B9HXT8 Predicted protein | 895 | 3e-094 |
| B9S287 Peptidyl-prolyl cis-trans isomerase, putative | 890 | 1e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 973 | 1e-105 |
| AT2G36130.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 159 | 3e-011 |
| AT4G33060.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 152 | 2e-010 |
| AT1G01940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 147 | 8e-010 |
| AT3G63400.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 145 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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