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Information for unigene UN10224
| FASTA Sequence |
| Unigene ID: UN10224 | Length: 1388 |
SSR | | GGACTTTAACTCGCATTATTCACCGGAAACAATGGCTTTAACGCGATTGTTCTCTCTCCTCTCCGTCGTCACTATCTCTCTTCTTC
TCACCACCACCGATGCTTCATCTCGCTGTCTACTAACTCCACACGAAACCACCGTCCTCGACGTCGTCTCATCTCTCCAGCAAACC
CAACACATCATCTCACTCGACCCGACTGTTTCCTCACTCACAACCACCACCACCACCCTACCCGGATCCGACCCGGTTTTCCTCAA
CTCATCCTCTCCACTATCTCTAGAGCTCCACTCCCGAGACACTCTCACCGCATCACAGCACAAGAACTACAAGAGCCTAGTACTAA
GCCGACTCGAGCGTGACTCATCCCGAGTCGCCGGAATCTTCGCCAAGATCCGCTTCGCCGTCGAGGACATCGACAGATCCGAACTC
AAACCCGTCTACAACGACGAAACCTCATCATACCGACCCGAGGATCTGACCACCCCCGTCGTCTCCGGAGCCAGCCAAGGAAGCGG
CGAGTACTTCTCCCGCATCGGAGTCGGAACTCCGGCGAAGGAGATGTTCATGGTCCTCGACACCGGAAGCGACATCAACTGGATCC
AGTGCCAGCCTTGCTCCGACTGCTACGTCGGACTCAGCGGGTTCAGCGTCGGCGGGCAGCAAGTCTCCATCCCTTCCTCGGTCTTC
GCCGTCGACGCTTCCGGCGCCGGAGGAGTGATCCTCGACTGCGGAACCGCCGTGACTCGGCTCCAGACTCAGGCCTACAACTCTCT
GCGCGACGCGTTCGTGAAGCTCACGTCGAATCTCAAGAGGGGGGCGTCGAGCATCTCGCTCTTCGACACGTGCTACGACTTCTCGT
CTCTCTCCACCGTGAAAGTCCCCACGGTGGCGTTTCATTTCACCGGAGGTAAGTCGATCGATCTGCCGGCGAAGAACTACTTGATC
CCTGTGGACGATGCGGGGACGTTCTGCTTTGCTTTCGCTCCGACGTCGTCTTCGTTGTCGATCATAGGGAACGTGCAGCAGCAAGG
GACGCGTATCACTTACGATCTGGCGAATAATCTTATCGGGTTGTCAGCGAATCAATGCTAAAAAGGAAAGTGGATGATGATGATTA
GTGGTTTTACAGTTCTATCAGTAAAACTCTTTATTTGTTCTTGTGTTCTTTAATATGGATTACAAAAATCTTAAGTGTGAATCTTT
TCAATTTAATCAGTAGTTATTTTCGTCTTTTTATCGATTAATAAATAGGATTAGTTGTTATAAAATTTTAAAATGTTGTCTGAGCG
AGATGCTTTTAGTTATTGTTCGATAGTTTGTTGTCTTCGTGAGGAAAGAGCATGTCAAGTTAAGTTTTATTGTAACAAAAGAAAAG
TCTTCGAAAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188478 aspartyl protease family protein [Arabidopsis thaliana] | 770 | 2e-079 |
| AAL87345 putative chloroplast nucleoid DNA-binding protein [Arabidopsis thaliana] | 767 | 5e-079 |
| BAJ33681 unnamed protein product [Thellungiella halophila] | 737 | 1e-075 |
| XP_002885261 aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] | 715 | 5e-073 |
| ABK94105 unknown [Populus trichocarpa] | 594 | 5e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q766C2 Aspartic proteinase nepenthesin-2 | 248 | 3e-020 |
| Q17RH7 Putative protein TPRXL | 157 | 1e-009 |
| Q8BTI8 Serine/arginine repetitive matrix protein 2 | 144 | 3e-008 |
| Q9UQ35 Serine/arginine repetitive matrix protein 2 | 142 | 6e-008 |
| Q766C3 Aspartic proteinase nepenthesin-1 | 136 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LS40 CND41, chloroplast nucleoid DNA binding protein-like | 770 | 1e-079 |
| Q8RXI1 Putative chloroplast nucleoid DNA-binding protein | 767 | 3e-079 |
| A9PCK2 Putative uncharacterized protein | 594 | 4e-059 |
| B9N2X4 Predicted protein (Fragment) | 594 | 4e-059 |
| B9RE23 Aspartic proteinase nepenthesin-1, putative | 581 | 1e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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