Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN10238

FASTA Sequence
Unigene ID: UN10238Length: 1483 SSR 
GGGTTTCATATACATCTCTTTCTTAACCCACCTGAGTTTCTCCCCATTACTCACTCTTATGTGAGATTTATTCTTTCTCATCACTT
TTCTTTTGTTAGTTTATAAAAATCAAGATCCTCTGTTTTCCTACATGGGCCTCCTCTGTTTCGTTTCTCCAAATGTCCTTTTAATC
TTTCTCTGGAATCGGATCTAGCAATAAGGAACTTGTTTGGTTAAAGGGATTCATCGTTCAGACAACAAAGCTCAAGAATGGAATCT
TTTTCCTCTTCTTGTCCCTAAGATTCTCACACCTTAGATGCTTATCATCATCTCTCTTTCTCTCTAAGATTCCATTTTTAAAATGC
CATTTTGATAGATCAGAAGTCCCAAAATCTTCTCTCTCTCTCTTTGAGTTCCACCATCGAGAGGCACAAGATGAACAGAGGAATCG
AAGTCATGTCACCAGCAACATACTTAGAGACATCATCGAACTGGTTGTTCCAAGAAAACAGAGGAACCAAATGGACAGCTGAAGAA
AACAAGAAGTTCGAAAACGCTTTGGCCTTTTACGACAAAGACACCCCCGACAGATGTTTCAAAGTCGCAGCTATGCTCCCAGGCAA
AACAGTCGGAGATGTGATCAAACAGTACAGAGAGCTAGAGGAAGACGTCAGCGACATCGAAGCTGGTCTTATCCCTATCCCTGGTT
ATGCCTCAGATTCATTCACGCTCGACTGGGGAGGGTATGATGCTGGAAACAATGGGTTTAACATGAACGGATATACTTCGCCACCG
TGGGAGAAAGAGAGGATCCGCCGCGAGAGCAGCGGAGCATGAAAGGAAGAAAGGTGTTCCATGGACAGAAGAAGAACACAGACAGT
TTCTGATGGGTCTTAAAAAATATGGTAAAGGTGACTGGAGAAACATAGCTCGCAACTTCGTGACCACACGGACGCCTACACAAGTC
GCAAGTCACGTTCAGAAATATTTCATAAGACAAGTCAACGGCGGTAAAGACAAACGCCGATCAAGCATCCATGATATCACCACCGT
CAACATCCCCGACTTTCTTGATGCTGCAGCCGCTGATACCGCAACCGCTAACGCGCCATGCTCACCCCCTTCACTAGGTGGAAGCC
AGCGGGAGGGGTCGGGTCAGTGGGAAGGTCAAACGATATATGATGAAACAGCGGCTGCATTTTTCAATCAAAACACGTTTCAAGAA
ACGCTACTTGGAATGTCATCAACGCCGTACATGGCAAAACTGCAGGAGCAAAGTTTCCTAAACGCATCGCAATTCGAATCGTATAA
TGCATATCTCCAAATGTAGCACAAGATGAAGATCTTTGAAGAATGCGTTATTAATCATTTAATAAAACTTTACTCTTTTGTTTTTA
TTTATTCGCCTGCATATACAAAAGAAAAGAAACTAGCTGCTACTTTTCAAGAGATATTTATTGTTTTTTTCCTGTGTTTTTGTGGC
TGATTCAATGAGTTTTCAGAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181344 myb/SANT-like DNA-binding domain-containing protein [Arabidopsis thaliana]8411e-087
AAC27179 putative MYB family transcription factor [Arabidopsis thaliana]8411e-087
XP_002879727 myb family transcription factor [Arabidopsis lyrata subsp. lyrata]8365e-087
AAU06309 MYB transcription factor [Hevea brasiliensis]4692e-044
ABC55648 MYB transcription factor [Hevea brasiliensis]4664e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q869R9 Myb-like protein J1856e-013
Q54HX6 Myb-like protein I1462e-008

TrEMBL top hits (Blast detail)Scoree value
O80435 Putative MYB family transcription factor8419e-088
Q8GXN7 MYB transcription factor8419e-088
Q66RN1 MYB transcription factor4691e-044
Q2MJS0 MYB transcription factor4663e-044
B9T8Y8 DNA binding protein, putative4654e-044

Arabidopsis top hits (Blast detail)Scoree value
AT2G38090.1 myb family transcription factor8471e-090
AT5G01200.1 myb family transcription factor3882e-037
AT5G58900.1 myb family transcription factor3882e-037
AT3G11280.1 myb family transcription factor3576e-034
AT3G11280.2 myb family transcription factor3576e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
112  50%

Unigene MembersMember information