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Information for unigene UN10240
| FASTA Sequence |
| Unigene ID: UN10240 | Length: 1400 |
| SNP | GGACAACACAACACAATCCAAATCCACAATCTTTATCCCAAAATTTCCACCTAATGGCTCCAACACTCTCTACCGCCCGATTCGCA
GACCCAGCTGAAGTAACCGAGTTCGTTGTAAACAAAGGCAACGGCGTAAAGGGTTTATCAGAAACAGGAATCAAAGCTCTCCCAGA
CCAATACATTCAACCATTCGAAGAACGTCTCATCAACAAGTTCGTCAACGAGACAGATGAAGCCATTCCTGTCATCGACATGTCGA
ACCCCGACGAGAGCAAAGTCGCTGAAGCTATATGTGACGCTGCTGAGAATTGGGGTTTCTTCCAAGTGATCAACCATGGAGTTCCT
TTGGAAGTTCTTGACAACGTGAAGGCCGCTACTCACATGTTCTTTAATCTTCCTGTTGAGGAGAAGAGCAAATACACAAAGGAGAA
TTCTCTGTCTACGAATGTTAGGTTCGGTACGAGTTTTAGTCCTCGTGCAGAGAAGGCTCTGGAGTGGAAAGATTATCTCAGTCTCT
TCTTTGTCTCTGAAGCTGAAGCTGAACAGTTTTGGCCTGATGTTTGCAAGAATGAAGCTCTAGAGTACATGAACAAGTCCAAGACA
ATGGTGAGGAAGCTTCTAGAGTACTTAGGGAAGAACCTCAATGTGAAAGAGCTAGACAAGACCAAAGAGTCACTCTTCATGGGTTC
AGTTCGAGTCAACCTCAACTACTATCCCATCTGTCCTAACCCTGACCTAACTGTTGGCGTTGGTCGCCACTCAGACGTCTCTTCCC
TCACCATTCTCTTACAAGACCAGATCGGTGGCCTCCACGTGCGTTCTCTGTCGTCAGGGAACTGGGTTCACGTGCCACCGGTCCCC
GGATCTTTCGTGATTAACATCGGAGACGCCATGCAGATCTTGAGCAATGGTCGTTACAAGAGCGTGGAGCATCGTGTCTTAGCTAA
CGGTAGTAACAACAGAATCTCGGTTCCTATCTTTGTGAATCCAAAACCAGAGTCCGTGATTGGTCCTCTTCCTGAGGTGATAGCAA
ATGGAGAGGAACCTATCTACAGAGATGTCGTGTACTCTGATTATGTCAGGTACTTCTTCAAGAAGGCACATGATGGAAAGAAGACC
GTTGATTATGCCAAGATATGATCACAATCAGCTCTCGATGGAGTTTGGTTTCTTGGTTTTATTTGTTTGTTGCTCCTTGTCTGTAT
TTGTGTGTGAATAAAGAAGAGACATAGTCTGATGGCTTCTTGGGACTTTATTTGATAGTGTTGTATAAGCTGCAATTTCTCTTTTT
GTCTACTTAAGTGTTACGCAATTTGCCCATGATTTATTCGTTTGTATTTGTATTTTTTATTATAAGCTTCGAGTATTATGCAATAT
TTTTGAAATTGGTTATTTTACCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885061 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1773 | 1e-195 |
| XP_002882832 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1765 | 9e-195 |
| NP_187970 oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] | 1727 | 2e-190 |
| NP_175925 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1489 | 9e-163 |
| XP_002299115 predicted protein [Populus trichocarpa] | 1338 | 3e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96330 Flavonol synthase/flavanone 3-hydroxylase | 475 | 1e-046 |
| Q9M547 Flavonol synthase/flavanone 3-hydroxylase | 473 | 2e-046 |
| Q07512 Flavonol synthase/flavanone 3-hydroxylase | 471 | 4e-046 |
| Q07353 Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) | 457 | 2e-044 |
| Q05963 Naringenin,2-oxoglutarate 3-dioxygenase | 454 | 4e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LHN8 At3g13610 | 1727 | 2e-190 |
| Q9C899 At1g55290 | 1489 | 6e-163 |
| B9GLG4 Predicted protein | 1338 | 2e-145 |
| B9SIK9 Leucoanthocyanidin dioxygenase, putative | 1265 | 6e-137 |
| B9SIK8 Leucoanthocyanidin dioxygenase, putative | 1264 | 7e-137 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13610.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1728 | 6e-193 |
| AT1G55290.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 1490 | 3e-165 |
| AT3G12900.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 890 | 9e-096 |
| AT5G12270.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 788 | 6e-084 |
| AT2G38240.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein | 522 | 4e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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