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Information for unigene UN10254

FASTA Sequence
Unigene ID: UN10254Length: 901  SNP
ATATATCCTCTAATCTTGTTTTATAACTTAAAACTCTTATGATTATTAATTTAACATACGTTACAGTTGATAGTGGTTACAGATTT
CTATTTGTATATGAGAGTCTTATGCTTTCATAAAAAAGACAAAGGTTTAACGAAGAAAATAAAGATCAAGCCAAATGTTGCTGTTG
CTCTTCCTCCTCCAAGTCATCATCTTCTTCTTCAGAGCTCAACCTATCTTCTTCAGATTCGATAAACTGACGTCGGAGACTGCTCT
GAACAGCTGCGATAGTCCGAATGATTACGAGCATTGGCAATAGTATACCAATGGCCTTCAGTGTTAATACCGTCAAAATCGTGAAG
GGATATTCGTCGGTTCCGTAAACCACATCAAACGCATGCTTTATCAACAAAACCACCGATAGAATAAGAGCCAAGTATCTACAACA
AGAAGCGCCTCTGTCAACTTCAGAGTTGCATTCTGGAAATTCTGATTCAGTTCTATTCACTAATCTTCTATTTCTTCTTCCTCCAT
ATTGTCTCCTCGTCCTGATTGTGACTGCTGCTTCAACTAAACGAGATGGTTTTGAAGTTGTGGTGTATCCAGGTTTATAATCCTGG
AGACATATTTCACAAATCGTGTTTCCTTTCTCATCGCACCATCGTTGTATGCAATCTCTGTGAGCAAACTTGACGGTGCCTGAGCA
AGAACAAGGAGCTTCAAAGTAGCTCTCTGCTTCTTCTTCTTCGTGACAAATCCTGCAGCGTGAGAAACTCGAATTCATATCTGTAT
CTTCTATGAATATTATCACGTCTCCCATCTCTCCGATCGTTCGTCTCTTCGTTTGAACTTAGCGGACAAAAAAGGCGCTCTTCGTT
TCAAAAGCTTTCCTCTGTTTTTCTTTTATTTTTTTCTGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892113 predicted protein [Arabidopsis lyrata subsp. lyrata]9375e-099
NP_171761 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]9196e-097
AAG10626 Unknown protein [Arabidopsis thaliana]9152e-096
XP_002872858 hypothetical protein ARALYDRAFT_490373 [Arabidopsis lyrata subsp. lyrata]7466e-077
NP_567222 protein pitchoun 1 [Arabidopsis thaliana]7224e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q8TCQ1 E3 ubiquitin-protein ligase MARCH11414e-008
Q6NZQ8 E3 ubiquitin-protein ligase MARCH11414e-008
Q32L65 E3 ubiquitin-protein ligase MARCH21371e-007
Q5T0T0 E3 ubiquitin-protein ligase MARCH81343e-007
Q0VD59 E3 ubiquitin-protein ligase MARCH81334e-007

TrEMBL top hits (Blast detail)Scoree value
Q9FWY0 T14P4.10 protein9151e-096
Q9XF50 At4g020757223e-074
C6TCD6 Putative uncharacterized protein5207e-051
B9RNF6 Protein binding protein, putative5135e-050
B7FL62 Putative uncharacterized protein4964e-048

Arabidopsis top hits (Blast detail)Scoree value
AT4G02075.1 PIT1 (pitchoun 1); protein binding / zinc ion binding7231e-076
AT2G01275.1 zinc finger (C3HC4-type RING finger) family protein3377e-032
AT2G01275.2 zinc finger (C3HC4-type RING finger) family protein3377e-032
AT1G02610.1 zinc finger (C3HC4-type RING finger) family protein3342e-031
AT5G38070.1 zinc finger (C3HC4-type RING finger) family protein3152e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  29%
 
91  14%
 
102  29%
 
81  14%
 
111  14%

Unigene MembersMember information