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Information for unigene UN10270
| FASTA Sequence |
| Unigene ID: UN10270 | Length: 1770 |
SSR | | GGAAAATAAAAAAAAATCAAAAAAAAAAATCAAAAAGACAGAGAAAATACAGAGAAATCAAATCCCCAAATATGGAATTCAGACAG
AGTCGCAACTAGATTTGTCATCTCTCTTTCCCCTCTTTCTCCTGTAAATCCAATCGGAGTTACGATCTTTTCCCCCCTCGCATCGT
AACTCCTCACCAGAAAAAACAAATCTGCTTCCCGATCTCGATCTTGATCCCGTTCTTCACGATTTAAACAAAAAAGGGAAGGGAGG
AAGAATAGCAAGTTTTGATCTATTGGGTTTCTAAAAATCTTTAGAAGTAAGTGAAGAAGCATTGAGAGAGGGGTTTATATATATAA
ATATATATATATATGTGAGTTATGGTATCAGAGACTATATTGCGGATCGTAGCACCATGTTGGAGACGACCTTCTGTGAAGGGAGA
TCATTCAGCTAGAGGAGGAGATGTTAATGGGAGGTGTGATGGGCTTCTTTGGTATAAAGATTCTGGCAACCATGTTGCTGGAGAGT
TTTCGATGTCTGTGATTCAAGCTAACAATCTTCTCGAAGATCATAGCAAGCTTGAGTCTGGTCCCGTTAGTATGTTTGATTCGGGT
CCTCAAGCTACTTTTGTCGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTGCTCGGTTTGTCAATAAACACCTCTTTGATAATAT
CAGAAAGTTTACGTCTGAGAATCATGGAATGTCTCCATCCGTCATAACGAAAGCGTTTTTAGCTACGGAGGAGGAGTTTCTTTCTC
TTGTTCGGCGGCAGTGGCAGACAAAGCCGCAGATTGCTTCTGTTGGAGCATGTTGTCTGGTAGGGATCATATGTAGTGGATCTTTG
TACATCGCCAACGCGGGTGACTCTCGGGTTGTGCTAGGAAGACTGGAGAAAGCTTATAAAATCGTCACGGCTGTTCAGTTATCTTC
TGAGCACAACGCGAGTTATGAATCTGTGAGAGAGGAGTTGCGGTTGTTGCATCCTGATGATCCTCAGATTGTGGTCTTGAAGCACA
AAGTCTGGCGTGTCAAAGGTATTATACAGGTGTCAAGGTCCATTGGTGATGCATACTTAAAGAAAGCAGAGTTCAACAGGGAGTCG
CTATTAGCAAAGTTCAGGGTGCCTGAGACTTTTCATACGCCAATCCTAAGAGCAGAGCCTGCAATTACAGTACACAAAATCCACTC
CGAGGATAAGTTTCTCATATTTGCATCAGACGGCTTATGGGAGCACATGAGCAATCAGGAAGCTGTTGACATTGTGAACACTGGTC
CTCGTAATGGGATTGCGAGGAAGCTCATAAAAACAGCTCTAAGAGAAGCAGCAAAGAAGAGAGAGATGAGATATTCAGATCTAAAG
AAGATCGATAGAGGAGTGAGGAGACATTTTCATGATGATATAACGGTCATTGTTGTGTTTCTTGATTCACATCTCGTTAGTAGAAG
TATCTTGCGCCGACCTCTCGTCTCCATCTCAGGCGGTGGTGACTTGGCTGGACCTTCTTCTACCCCTTGACTCACTCTCTTACCAC
AAATCTATAATATATATATTCTAATAATATTCAACATATCCACTATATATAAACACATTGCAGAAACACTTCCAAGTTCCTTCTCT
TTTTTCCTTTATATATAACAAAAAAAAAACATTTTAACTCTGTTTTTTATTCATCGCAAGAAAAAAAAAAGAATGAATTGAAACAT
CAATGTATAGGGCTGAGTTTATTATGATAAAAAGAGATATCATTTGTTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34487 unnamed protein product [Thellungiella halophila] | 1861 | 9e-206 |
| XP_002884915 phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata] | 1837 | 5e-203 |
| NP_187868 putative protein phosphatase 2C 38 [Arabidopsis thaliana] | 1833 | 2e-202 |
| AAG51012 protein phosphatase 2C, putative; 16828-18284 [Arabidopsis thaliana] | 1807 | 2e-199 |
| XP_002281610 PREDICTED: hypothetical protein [Vitis vinifera] | 1544 | 5e-169 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LHJ9 Probable protein phosphatase 2C 38 | 1833 | 6e-204 |
| Q94CL8 Probable protein phosphatase 2C 48 | 1499 | 3e-165 |
| Q10S32 Probable protein phosphatase 2C 28 | 1329 | 2e-145 |
| Q5Z8P0 Probable protein phosphatase 2C 60 | 1315 | 7e-144 |
| Q7XCJ7 Probable protein phosphatase 2C 72 | 1291 | 5e-141 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HTZ6 Predicted protein | 1537 | 2e-168 |
| B9HM15 Predicted protein | 1536 | 3e-168 |
| C5WTI1 Putative uncharacterized protein Sb01g030180 | 1336 | 4e-145 |
| B9SXA9 Protein phosphatase 2c, putative | 1326 | 6e-144 |
| A2XC97 Putative uncharacterized protein | 1324 | 1e-143 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12620.1 protein phosphatase 2C family protein / PP2C family protein | 1833 | 6e-205 |
| AT3G12620.2 protein phosphatase 2C family protein / PP2C family protein | 1833 | 6e-205 |
| AT3G55050.1 serine/threonine protein phosphatase 2C (PP2C6) | 1499 | 3e-166 |
| AT3G55050.2 serine/threonine protein phosphatase 2C (PP2C6) | 1499 | 3e-166 |
| AT4G38520.1 protein phosphatase 2C family protein / PP2C family protein | 1268 | 2e-139 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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