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Information for unigene UN10276
| FASTA Sequence |
| Unigene ID: UN10276 | Length: 883 |
SSR | | AAAGAAAACAAGCCCGACATGTTTTTTTTTCTTTATTCAGTACATTATTATTTTGTTCACTCAATAACAACAAACAAAGAGATCAA
AATGCACAACAACTGCAATCAATATCAAGCGCAAGCAATCTCACAAAATCCATATGATCAAGAACAACAACATCACTGCTGCAACT
GATCATAAACACTATAAATAAGCCAACCTTCAATAGCAGCAGCTTCAAGACGATCATTCCCCCCAGCTTCATCCCACTTAGACTGA
ATCGAATCGAGCCTGCTCATATCATACCAAAGTATCTTATGAGCCAACTCTCTCGTCCCAAGGAACTCAACGATCGGAGTCCCTCT
CGCTTTCGCAGCAAGCTTCCCGATCTCCAAAGAGCTCCTGATCACAATCCCGTGATTCTCCTTGAGCAAGACAAGGTCTTCCTGGA
TCTGAACGCCGACGAAGGTGACGAACTTGGAGGCGAAGAAGCGGTAGAGATCCTTGAGGTTGTCGTTGAACGGGTTCGGGAGGCGG
AGGAAGAGACAGAAGTTCTTGGTGCTCAGCTTCACCGAGGAGAGACGCCACTCTGACTTTGCGTCGGCGGATTTGCCGACGTCCCA
GTAGAGGTCGAAGACGATGGCTCTGTTGCCGTTCCAGACGCAGTCTTCTAGGAGACGGGAGAGGTATGGAGAGATGTCGGTTGATG
ATTCGACGTCTATGGCTTTGGTCTGGATCCAGTAACCGTCAACCATCGCGAACCCTGGCCCATCGAAGTTGGCCATGTTGTGGTCT
TTTTGAGTGTTTCGCTGCGATGAAGGTTGATGTTCGTACACAGGATTAAAACTGATATTGGGTTGAGAGAGAGAGAGAGAGAGAGA
GAGATATGAGAAGAAGACGAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187783 DnaQ-like 3'-5' exonuclease domain-containing protein [Arabidopsis thaliana] | 923 | 2e-097 |
| XP_002884864 hypothetical protein ARALYDRAFT_897381 [Arabidopsis lyrata subsp. lyrata] | 911 | 5e-096 |
| NP_196263 DnaQ-like exonuclease domain-containing protein [Arabidopsis thaliana] | 747 | 5e-077 |
| XP_002873257 hypothetical protein ARALYDRAFT_487454 [Arabidopsis lyrata subsp. lyrata] | 738 | 5e-076 |
| 1VK0 Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At5g06450 | 736 | 9e-076 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNG3 Uncharacterized protein At5g06450 | 747 | 2e-078 |
| Q17RH7 Putative protein TPRXL | 136 | 2e-007 |
| P32323 A-agglutinin anchorage subunit | 133 | 3e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G11770.1 nucleic acid binding | 924 | 6e-100 |
| AT5G06450.1 nucleic acid binding | 747 | 2e-079 |
| AT5G01280.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 40332 Blast hits to 19265 proteins in 905 species: Archae - 97; Bacteria - 3595; Metazoa - 17370; Fungi - 8276; Plants - 837; Viruses - 1209; Other Eukaryotes - 8948 (source: NCBI BLink). | 122 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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