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Information for unigene UN10279

FASTA Sequence
Unigene ID: UN10279Length: 1322 SSR 
GGATCTGAAAAGTTCGTGTAAGAACAATTCATATCTCTCTCTCTCTCTCTCCTCTGATTGGCAATAAGACACATTCAAATCCAATC
TATATCTCCCTATTCCAATTCCGTACATACTCTTCTTATTCCTTTGCATAATCTTTCTTCTTCGTCGGTTGGGTGCACCGTCAACT
TTGAGCTTCATTCTCTGATCGTGTTTGAAAGATTGCTAGCTTTTGAGAAGAGCTATGAGTAGCTCAGGTAAAAGGAGACTAAGTGA
TCTTTTAACTCAATCTGATAACCGAGTCTGCGCTGATTGTAGCGCTCCAGATCCTAAGTGGGCGTCAGCAAACATCGGAGTGTTCA
TATGCTTGAAATGTTGCGGTGTGCACAGAAGCCTTGGTACTCATATCTCAAAGGTCTTATCTGTGACATTGGATGAATGGTCGGAA
GATGAAGTGGATTCAATGATTGAAATTGGAGGAAATGCCTCTGCAAATTCAGTTTACGAGGCATTTATACCTGATGGTTGCTCTAA
GCCTGGACCTGATGCTAGTCCTGACCAACGTATGCAGTTTATCAGGTCAAAATATGAACACCAAGAGTTTCTAAAACCAAGCTTGA
GGATCACATCCGTGAAGGGCTCAAATTCATCATCATCACAACAGCCGCATCTTGAAGGCATGGTTGAGTTTATTGGATTGTTGAAG
GTGACTCTTAAGAAAGGAACCAATCTAGCTGTCAGAGATATGAGGACAAGCGATTCTTATGTTGTGTTGACTCTCGGACAACAGAC
CGCAAAATCAACTGTAATGAAGGGCAACTTAAACCCGGTTTGGAACGAGGAACTCATGCTCTCTGTTCCTCACAACTATGGCTCAG
TAAAGTTGCAAGTGTTTGATTATGACGCACTCTCTGCTGATGACATAATGGGAGAAGCTGGGATTGATATCCAACCTCTGATTACA
TCTGCAATGGCCTTAGGAGACCCTGAAATGTTTGGCGATATGCAGATTGGTAAATGGCTTAAATCGCGCGACAATGCTCTTATAGA
GGACAGCATCATCAACATTGCAGATGGGAAAGTGAAACAAGAGGTTCATATCAAGCTTCAGAATGTTGAGTCTGGTGAAATAGAAC
TGGAACTTGAGTGGCTCCGTCTTGACCAATAAATGTAACAAACTCTATGTGTTTTGAGTCATTTTTTTTGTGCACAGACAAAGTGA
AATCTTGATCCCAAATGTTTCATTTAAAACCTAAGATAAGACGTTTGTAAGAAGCCAAATCAGGTTTCAACCCCAACTTCAACATT
TCATCATGATACTTCATAGCTTTCTTCATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869903 zac [Arabidopsis lyrata subsp. lyrata]7845e-081
NP_567620 ADP-ribosylation factor GTPase-activating protein AGD12 [Arabidopsis thaliana]7801e-080
AAM65970 putative GTPase activating protein [Arabidopsis thaliana]7801e-080
CAA17535 putative protein [Arabidopsis thaliana]7801e-080
BAF01268 hypothetical protein [Arabidopsis thaliana]7764e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q9FVJ3 ADP-ribosylation factor GTPase-activating protein AGD127806e-082
Q8LFN9 Probable ADP-ribosylation factor GTPase-activating protein AGD137081e-073
Q8L7A4 Probable ADP-ribosylation factor GTPase-activating protein AGD114803e-047
Q5F413 Stromal membrane-associated protein 23192e-028
Q5EA00 Stromal membrane-associated protein 23092e-027

TrEMBL top hits (Blast detail)Scoree value
B9SB30 ARF GTPase activator, putative6732e-068
B9GG15 Predicted protein6714e-068
C0JAE9 ZAC (Fragment)5999e-060
C5Z5R3 Putative uncharacterized protein Sb10g0238805981e-059
C5XZS8 Putative uncharacterized protein Sb04g0295305962e-059

Arabidopsis top hits (Blast detail)Scoree value
AT4G21160.1 ZAC; ARF GTPase activator/ phospholipid binding7814e-083
AT4G21160.3 ZAC; ARF GTPase activator/ phospholipid binding7814e-083
AT4G21160.2 ZAC; ARF GTPase activator/ phospholipid binding7814e-083
AT4G21160.4 ZAC; ARF GTPase activator/ phospholipid binding7814e-083
AT4G05330.1 AGD13 (ARF-GAP domain 13); ARF GTPase activator/ zinc ion binding7098e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  13%
 
94  50%
 
81  13%
 
62  25%

Unigene MembersMember information