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Information for unigene UN10280
| FASTA Sequence |
| Unigene ID: UN10280 | Length: 524 |
SSR | | GGGAAAACAAAACACCATTTTCACCCAGCCTGATCTCTCTCTCTCCGCCACAATTCGCCGGAAAAGTAAGATGGCAACTGGTGGAA
AAGTGTCATTCAAAGTCACCCTGACTTCGGACCCTAAGCTTCCTTTCAAAGTATTCAGCGTGCCGGAGGGAGCTCCGTTCACGGCG
GTTCTGAAATTCGCAGCAGAGGAGTTCAAGGTTCCTCCTCAAACCAGCGCCATCATCACCAATGATGGGATCGGGATCAATCCTCA
GCAGAGTGCAGGAAACGTGTTCTTGAAGCATGGATCTGAACTAAGACTCATCCCGCGTGATAGAGTTGGAGCTGCGTTTTCTAATT
GATCCCATGATTTGCTGGCAGTAAAGCAATAACGAGTGAAACTATATGACGTACTTTTAAAAGAAATTAAAAATAAAAACCGAGCA
TATTGAAGTGGTTGATGTACAACTTTTTCTTTTTCTCTTTGAATAAATAAACATATGATGATGATGTTCGCATAATTGGATCCAAG
GTTAGATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_177894 ubiquitin-fold modifier 1 [Arabidopsis thaliana] | 448 | 7e-043 |
| XP_002887696 hypothetical protein ARALYDRAFT_895660 [Arabidopsis lyrata subsp. lyrata] | 440 | 6e-042 |
| ACU14017 unknown [Glycine max] | 428 | 1e-040 |
| XP_002301006 predicted protein [Populus trichocarpa] | 422 | 7e-040 |
| XP_002285835 PREDICTED: hypothetical protein [Vitis vinifera] | 421 | 9e-040 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9CA23 Ubiquitin-fold modifier 1 | 448 | 4e-044 |
| Q94DM8 Ubiquitin-fold modifier 1 | 416 | 2e-040 |
| Q5PU89 Ubiquitin-fold modifier 1 | 387 | 4e-037 |
| Q94EY2 Ubiquitin-fold modifier 1 | 383 | 1e-036 |
| Q176V0 Ubiquitin-fold modifier 1 | 379 | 4e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SXP4 Putative uncharacterized protein | 428 | 1e-040 |
| A9PC65 Predicted protein | 422 | 5e-040 |
| B9S1Q5 Ubiquitin-fold modifier 1, putative | 421 | 6e-040 |
| B9H7B5 Predicted protein | 418 | 1e-039 |
| A2WZD3 Putative uncharacterized protein | 416 | 2e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G77710.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-like, Ufm1 (InterPro:IPR005375); Has 170 Blast hits to 170 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink). | 448 | 4e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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