 |
Information for unigene UN10292
| FASTA Sequence |
| Unigene ID: UN10292 | Length: 1132 |
SSR | | ACAGTGAGAAGAGAGAGAGAGACTCAAACAATGGCGACTCTGAAATTCTCTCCTTCTTCTTCAACTCAGCCTAAGATATCAGCCGC
ATCATGTTTCATCCCTAACGCAGCGCGTGCCTTTAACGCGACACTTTCTCCGTCTAAGTCGCGGTTCGTGGGTAATAATAATTGCC
TCAAAGCAAAACAGAGAATAGTAATAATACAGAGAGCATCTCGCTCCGGTGGAATCACTTTCTGTGCTTCATCTTCACCGGGGACT
CTTCCCTCTGCTCTTCTCTTCGACTGCGATGGAGTTCTTGTCGATACCGAGAAGGATGGTCACAGGATCTCCTTCAACGACACTTT
CAAAGAGAGAGACTTGGGTGTTACATGGGATGTTGATCTGTACGGAGAGCTACTGAAAATCGGTGGTGGGAAAGAAAGGATGACGG
CGTACTTTAACAAGGTGGGTTGGCCTGAGAAAGCCCCCAAAGATGAAGCAGAGAGGAAAGCGTTCATAGCTGGGCTTCACAAGCAG
AAGACTGAGCTTTTCATGGTTCTCATCGAGAAGAAGCTGCTTCCTCTTCGACCCGGTGTTGCCAAACTGGTTGATCAAGCTCTAAC
GAATGGAGTAAAAGTCGCCGTGTGCAGTACTTCAAATGAAAAGGCGGTGTCTGCTATAGTTTCATGCTTGCTTGGACCAGAAAAAG
CAGAGAAGATCAAGATATTTGCAGGAGATGTAGTCCCCAAAAAGAAGCCTGACCCGGCCATCTACAACTTGGCAGCTGAAACCCTT
GAAGTTGATCCCTCAAAATGTGTTGTGGTTGAAGACAGCGCTATCGGGCTAGCAGCTGCAAAAGCTGCGGGAATGACTTGTATAGT
TACAAAGAGTGGATACACGGCGGATGAAGATTTTGTGAACGCAGACGCGGTTTTCGACTGCATTGGAGACCCTCCTGAAGAGAGGT
TTGATTTGGCATTCTGTGGAAGCCTTCTCCAGAAACAGTTGGTTTAGTTTAAACCCTAAACCCCCACCGATAAAAATGATATTCGG
TTGTTTGTATCTCAACGTTGGTGTGTGTATAGATGAAGAGAGAGAGACATATATATTCATTGTAAAACCATACAGCCTCACTCATC
AAACTTTCTTCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875901 hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] | 1300 | 5e-141 |
| AAM63700 unknown [Arabidopsis thaliana] | 1292 | 5e-140 |
| NP_566903 haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | 1288 | 1e-139 |
| BAD43740 unknown protein [Arabidopsis thaliana] | 1281 | 9e-139 |
| CAB41156 putative protein [Arabidopsis thaliana] | 1279 | 1e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P40119 Protein cbbY, chromosomal | 333 | 3e-030 |
| P95649 Protein cbbY | 276 | 1e-023 |
| O33513 Protein cbbY | 251 | 1e-020 |
| Q9X0Y1 Phosphorylated carbohydrates phosphatase TM_1254 | 146 | 2e-008 |
| P40852 Phosphoglycolate phosphatase, chromosomal | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCE8 Putative uncharacterized protein | 1292 | 3e-140 |
| Q94K71 Putative uncharacterized protein At3g48415 | 1288 | 9e-140 |
| Q67ZZ0 Putative uncharacterized protein At3g48415 | 1281 | 6e-139 |
| Q9STM2 Putative uncharacterized protein T29H11_60 | 1279 | 1e-138 |
| B9RAP3 2-deoxyglucose-6-phosphate phosphatase, putative | 1172 | 3e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48420.1 haloacid dehalogenase-like hydrolase family protein | 1288 | 5e-142 |
| AT4G39970.1 haloacid dehalogenase-like hydrolase family protein | 404 | 2e-039 |
| AT5G45170.1 CbbY protein-related | 178 | 3e-013 |
| AT4G21470.1 ATFMN/FHY (riboflavin kinase/FMN hydrolase); FMN adenylyltransferase/ riboflavin kinase | 158 | 5e-011 |
| AT1G56500.1 haloacid dehalogenase-like hydrolase family protein | 151 | 4e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
