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Information for unigene UN10293

FASTA Sequence
Unigene ID: UN10293Length: 898 SSRSNP
GGAAGCCACCGTCGAGTTCATTTACTTTATACTTTCTCTCTCTCTCTCCTCCGTCTCAGATTTCTTCTCCGTTGGGAAAACTCCAA
ATCTCCACTCAAAGAACCCTAATCTTCCCGATGTCGATCTTCGAGTACAATGGAAGTGCGGTTGTGGCTATGGTTGGGAAGAACTG
CTTCGCCATCGCCAGTGATCGTAGGCTCGGTGTGCAGCTCCAGACGATCGCCACCGATTTCCAGAGAATCTCCAAGATCCACGACC
GTGTCTTCATCGGCCTCTCTGGTCTCGCCACCGATGTCCAAACACTGTACCAGCGCTTGGTGTTTCGTCATAAGCTGTATCAGCTT
CGTGAAGAGAGAGACATGAAGCCTGAGACTTTCGCCAGTCTCGTCTCCGCCATTCTCTACGAGAAAAGATTTGGTCCTTACTTATG
CCAACCAGTTATTGCCGGTTTGGGAGAAGATGACAAGCCTTTCATCTGCACCATGGACTCCATTGGAGCTAAGGAGTTGGCTAAAG
ATTTTGTTGTATCTGGAACTGCTTCAGAATCACTTTATGGTGCCTGCGAAGCTATGTACAAGCCAGATATGGAAGCTGAGGAATTG
TTCGAGACTATTTCACAGGCACTTCTATCGTCAGTTGACCGTGATTGTCTGAGTGGTTGGGGAGGGCATGTCTACGTTGTAACACC
AACGGAGATTAAAGAGAGGATCCTAAAGGGAAGGATGGACTGATCCGACTCGCCACGCCATCATCATCTGCTTCCATCCAAGATGT
TTTTCGCTGTAATCCGGTTTAATCATAGAACCATTCAGTCTCTGATGTTATGTTATGACTTGTGGATGAAGTTTGAATTTCCATCT
CTTTGGATATTTTATTTTAATTCCTACTAGAGTTAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564149 proteasome subunit beta type-3-A [Arabidopsis thaliana]10414e-111
XP_002890456 predicted protein [Arabidopsis lyrata subsp. lyrata]10371e-110
AAM62756 putative 20S proteasome beta subunit PBC2 [Arabidopsis thaliana]10324e-110
XP_002887683 hypothetical protein ARALYDRAFT_895633 [Arabidopsis lyrata subsp. lyrata]10191e-108
NP_565156 proteasome subunit beta type-3-B [Arabidopsis thaliana]10145e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q9XI05 Proteasome subunit beta type-3-A10412e-112
O81153 Proteasome subunit beta type-3-B10142e-109
O65084 Proteasome subunit beta type-39632e-103
Q9LST7 Proteasome subunit beta type-39506e-102
Q9Y7T8 Probable proteasome subunit beta type-36397e-066

TrEMBL top hits (Blast detail)Scoree value
C6SXW4 Proteasome subunit beta type10002e-106
C6SV91 Proteasome subunit beta type9992e-106
B7FMI9 Proteasome subunit beta type9893e-105
B9H7H5 Proteasome subunit beta type9652e-102
A9NRN1 Proteasome subunit beta type9633e-102

Arabidopsis top hits (Blast detail)Scoree value
AT1G21720.1 PBC1 (PROTEASOME BETA SUBUNIT C1); peptidase/ threonine-type endopeptidase10421e-113
AT1G77440.1 PBC2; peptidase/ threonine-type endopeptidase10152e-110
AT1G77440.2 PBC2; peptidase/ threonine-type endopeptidase10152e-110

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  44%
 
122  22%
 
82  22%
 
61  11%

Unigene MembersMember information