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Information for unigene UN10303

FASTA Sequence
Unigene ID: UN10303Length: 1304 SSR 
CGAACTGAAACAGAATCTTCTTCTCGCAAGTTCCAGATGGGACCATTAACACAGACAAAACAAGAATAGTTTTACATATTGAAATA
AGCGAAACAAAATGAGAAAGATGATAAATCAAAAAAGAGAAGCAAAGGAAACAATGAGAATAAGTAAGTGTTCATAAAATGATCAT
CATTCATCGTCTGAGTACTCAAACTTAACTGAATGTGATTGAAGATCGATCTCTCCTCCTCTGTAGCTTCCTCTTTTCTTCTTCGT
CTTCTCATGTCGGAAACCCCTTCCTCTGACTTGCCCTAAAACCTCTTGAGCTTTAGCACCATAGCCCGAATCGGCACCACCCTTGG
CCCAATAAGAGTTGTCTTTAAGCCTATCGTCAGTGAACACAACTTCCTCAACGTTCACTCTCTGAAACGGTTTCTTCGGCTCTTTT
GAGTCGGAAAGCCCCTTTCCAGACTTCTTATTAGTTGATTTTGTTTCAACGTTACCGTTCTCCTGGACATCGGTTTGCTTAACAGG
TGTTTCTTGAACATCCATATCTTCTTCTTCTCCTGCCTTCTTCCTACGTTTAGAGTCCTCATCATCATCATCATCCTCTGTCTGTT
CTTTTGTCTCTTCTTCAGGCTCTGATCTTTTTCTCTTCTTGGAAACTCTCTCCTCATCACCCAAAGTCTCAGCCTCGGCAGATTTC
GACTTGGTCTTCTTCTTCTTCTTTTTCTCTTTCACTCCATCTTCGATCTCACCATCAGTCTTCTCCTCCTTAGCTACCTCCACTTT
CGGTTCCTTCTTGTTCTTCTTCTTCTCTTTAATCCCATCTTCAATCTCACCATCAGTCTCTTTAACCTTCTTCTTCTTCTTTTTCT
CCTTCTTTACTTCCTCCGCAGCTTCTTTCTTTTGATCATCAGATGCATTCTTCTCCACTTCATCCCCTGATTCATCTTTCCCCTCC
ACAGCTTCTAGACTGCTCTTGTTCAAAAACACGCGGTAAACTTCCTCTAGATCCGGTAACTCACTATCCAATTCCTTCTTCTCGAT
TTCGGCTTCGGAGAGGAGTTTCTTGAAGCATTTTGAGAACCCACATCGGTCCAAGTACTGAGCTATCGAACGGAGAAGGAGAGCCT
TCTGCTCCGATTTCAAGCTCAAGGCTTTGCTCTCTTTCCCCATAATAACCGGTCTAGAGATCAACACTTGGCGAGGCGTGAGAGCT
AAGAGGGCTGGGTCTAAGGTGTTTCGAGAAGGCTCCGTTGCTAGGGTTTTGGGCATATGTGTGTATATGAAGCTCGTGAGCTTTGG
AGAAAATCTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200522 uncharacterized protein [Arabidopsis thaliana]10462e-111
AAM61154 unknown [Arabidopsis thaliana]10425e-111
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]7021e-071
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]6171e-061
XP_002309003 predicted protein [Populus trichocarpa]5282e-051

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12904e-025
Q9U7E0 Transcriptional regulator ATRX homolog2322e-018
Q14978 Nucleolar and coiled-body phosphoprotein 12214e-017
Q55FI4 Nucleolar protein 582133e-016
Q869E1 DNA ligase 12053e-015

TrEMBL top hits (Blast detail)Scoree value
Q9LU74 AT5g57120/MUL3_610461e-111
Q8LFX8 Putative uncharacterized protein10424e-111
Q93WC7 AT5g57120/MUL3_66177e-062
B9HAX3 Predicted protein5281e-051
A3CJE4 Putative uncharacterized protein4762e-045

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).10467e-114
AT3G28770.1 unknown protein2142e-017
AT1G56660.1 unknown protein2052e-016
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase1792e-013
AT2G22795.1 unknown protein1783e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
122  50%

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