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Information for unigene UN10324

FASTA Sequence
Unigene ID: UN10324Length: 956 SSR 
CGGGGGTTTATTCACTCTATTATATGATTTTAATACAAATATCATTTCAGAAGCAAACAGGAATCTCACACATTTACAGAGAAACT
ACACACAAAAGAGGTAAACCTCAGAGAGAGAGAGAGAAGAATCAGATTGAGTTTGGAATACACAAGGAATAACAATTCGAGTTTTT
TTTTTTTGTATGAACATGGATATTCGGTCTCACTAGCTGCAGCAGCCAGTTTGGGGAGTAGTCTGGTGTTCTGATGAGTTTTGCTT
CAAGATGTTTCTCTTCACAGCACTTGATCCTTCTTCCAAAAGACTAGGTACCTCCATTATCTTCAAAGCCAGCTCTTCGAAACATT
GCTCTACGTTTTGTCGAGTTCTGGCACTACACTCGAGAAACATGCACTTGAGTTCTTTCGCTAGAGCAATCCCTTCTTCTCTGCTA
ACTCCTCTCTCAGATTCTCTATCAACTTTGTTTCCAACGAGCATCGTAACGCATTCTTGGTTAGTGGAGTAAAGCTCAATCTCCTT
ACCCCACACATCTACTAAGTTTGTAAATGTCTCTCTTCTCGTCACATCATACACGAGAATGATTCCTTGGGCGCCTCTGTAGTAAG
AGCTCGTCAATGTTCTAAACCGTTCCTGTCCAGCTGTGTCCCAGATTGTGAGTTTCAGTCTTTTGCCTCCTACTGTCAACTGTTTA
ATCTTGAAATCAACACCGATGGTAGGAGCGAGATCTTCAACGGAGGTGGAAATGAAGCTGACAAGCAAACTGCTTTTACCAACACC
AGAATCTCCAATCAACAATATCTTAAACGACAGATCGTTTCCACTTTTCCCAGTTGACGACCCCATTCTCTCTCACTCAGATACTT
GCTCGATCTTGTGAAGAAACCTTACGAGGGAAAGAAAGGTAGAAGAAACCCACGAGAGATCAAATCAAATCAAATCCAACTTATTC
ACACTTAATA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568121 RAB GTPase-C2A [Arabidopsis thaliana]9895e-105
XP_002326383 predicted protein [Populus trichocarpa]8873e-093
XP_002267276 PREDICTED: hypothetical protein [Vitis vinifera]8784e-092
XP_002322909 predicted protein [Populus trichocarpa]8632e-090
XP_002519452 protein with unknown function [Ricinus communis]8524e-089

Swiss-Prot top hits (Blast detail)Scoree value
P36862 GTP-binding protein yptV35143e-051
Q6DHC1 Ras-related protein Rab-18-B4864e-048
Q5ZLG1 Ras-related protein Rab-184812e-047
Q0IIG8 Ras-related protein Rab-184802e-047
Q9NP72 Ras-related protein Rab-184802e-047

TrEMBL top hits (Blast detail)Scoree value
O49841 AtRab GTP-binding protein9893e-105
B9MTI0 Predicted protein8872e-093
B9IFU0 Predicted protein8631e-090
B9S0D3 Putative uncharacterized protein8522e-089
Q40206 RAB1X8513e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G03530.1 RABC2A (RAB GTPASE HOMOLOG C2A); GTP binding / GTP-dependent protein binding / myosin XI tail binding9936e-108
AT3G09910.1 ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B); ATP binding / GTP binding / transcription factor binding8262e-088
AT1G43890.1 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7931e-084
AT1G43890.2 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7931e-084
AT1G43890.3 ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18); GTP binding7931e-084

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  40%
 
123  60%

Unigene MembersMember information