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Information for unigene UN10325
| FASTA Sequence |
| Unigene ID: UN10325 | Length: 1507 |
SSR | | CGCCTCCGTCTCTAGTTTAATCGGTGTTGGGTTTTTTCTTCTTCATCTGATCAATAATGGCTTCAGATGCGGATATGGAGGACTAC
GGGTTCGAGTACTCAGACGAGGAGCAGGAGGAGCAAGACGTCGACATCGAGAACCAGTATTACAACTCCAAAGGCAATGTCGAGAC
CGACCCCGAGGAGGCGCTCTCCGGCTTCGCCGAGGTTGTTAAGATGGAGCCTGACAAGGCTGAATGGGGTTTCAAAGCTCTGAAGC
AGACGGTGAAGATATACTATCGTCTAGGGAAGTACAGAGAGATGATGGATGCGTATAGAGAGATGCTTACGTATATCAAGTCGGCT
GTGACGAGGAACTACAGCGAGAAGTGTATTAACAGTATTATGGATTTCGTCTCTGGGTCTGCTAGCCAGAACACTGGTCTGCTTCA
GGAGTTTTACCAGACCACCTTGACTGCCCTTGAGGAGGCTAAGAATGAGAGACTGTGGTTCAAGACGAATCTTAAACTGTGCAACA
TCTGGTTTGACATTGGTGAATACAGACGGATGACTAAGATCCTGAAGGAACTGCATAAGTCTTGTCAAAAGAAGATGGGACGGATG
ATCAGAAGAAAGGAGTCAGCTGCTTGAGTTTATGCCATTGAAATTCAGATTTACACTGAAACTAAGACAACAAAAGCTCAAGCAAC
TGTACCAGAAAGCACTTGCTATCAAATCTGCTATTCCTCATCCTAGGATCATGGGTATTATCCGCGAGTGTGGTGGCAAGATGCAC
ATGGCCGAACGTCAGTGGGCTGAAGCAGCCACTGACTTCTTTGAGGCTTTCAAAAATTATGATGAAGCTGGCAACCAAAGGCGTAT
TCAGTGCTTAAGGTATCTTGTTCTTGCGAATATGCTGATGGAGTCAGAAGTGAATCCATTTGACGGTCAAGAGGCAAAGCCGTACA
AAAACGACCCTGAGATCTTGGCTATGACGAATCTGGTAGCAGCCTATCAACGAAACGAAATCATAGAGTTTGAGAAAATACTCAAG
AATAACCGGAAGACAATAATGGACGATCCATTCATCAGAAACTACATGGAAGATCTGCTGAAGAAGGTGAGGACACAGGTGTTGCT
GAAGCTGATAAAGCCCTACACAAAGATCGGGATCCCTTTCATATCGAAGGAGCTTAACGTGCCAGAGAAGGATGTGACGGAGCTGC
TGGTGTCGCTTATACTGGACAGCCGAATCGATGGACACATTGATGAGATCAACCGTTACTTGCTGAGAGGTGACAGTGCTAATGGA
AGGAAACTTCACAAGGCGGTTGATAAATGGAACACACAGCTCAAGTCTCTTTCCATGAGTATCACCAACCGAGTCTGTTAATTTAC
CAATCCACCTCTCTCTCTCTTTTCCATAGCTTTGACATTTTCGTGTTTCTACCATTTTGTGGATTACATTTTTTTTCCTTCACTTC
GCTGAATTCTCTTTTGATGGTGATATGTGAGTTACATTTTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33758 unnamed protein product [Thellungiella halophila] | 1167 | 2e-125 |
| XP_002880866 hypothetical protein ARALYDRAFT_481579 [Arabidopsis lyrata subsp. lyrata] | 1154 | 7e-124 |
| NP_565632 COP9 signalosome complex subunit 2 [Arabidopsis thaliana] | 1145 | 8e-123 |
| AAK91453 At2g26990/T20P8.4 [Arabidopsis thaliana] | 1140 | 3e-122 |
| XP_002532580 cop9 signalosome complex subunit, putative [Ricinus communis] | 1072 | 2e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W207 COP9 signalosome complex subunit 2 | 1145 | 3e-124 |
| Q54HL6 COP9 signalosome complex subunit 2 | 827 | 2e-087 |
| Q6IQT4 COP9 signalosome complex subunit 2 | 800 | 3e-084 |
| P61201 COP9 signalosome complex subunit 2 | 797 | 7e-084 |
| P61202 COP9 signalosome complex subunit 2 | 797 | 7e-084 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T2W1 Cop9 signalosome complex subunit, putative | 1072 | 2e-114 |
| B9N6U1 Predicted protein | 1067 | 6e-114 |
| A9P7W9 Predicted protein | 1062 | 2e-113 |
| B8LQ67 Putative uncharacterized protein | 1036 | 2e-110 |
| Q56WM0 Putative PCI domain protein | 1033 | 5e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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