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Information for unigene UN10331
| FASTA Sequence |
| Unigene ID: UN10331 | Length: 1185 |
SSR | | GTCAGAAAGGAGGTGTGATTAAATGGTAAACACTGATTCACAAATCACAGTTCAACAGATTAGCTTTATCTCAACCCCTATGGCTG
CACATTTTTCGAATCAACATAACCTAAAAATCCCTACAAGTCCTATACTTTAACCAAGTAAGACTCAGCTGTATAAATTAAAAACT
CTTCTAAAATACTTGCACATTGAGATAGACTGAGAAACTCTCTTGTCTAAGCCTGTTCACCCTCTTCCTCTTCTTCCTTGGGTTCT
TCACCTTCTTCCCCTTCTTCCTTGGGTTCTTCACCCTCTTCCCCTTCTTCCTTGGGTTCTTCACCCTCTTTGGTCTCCTCTTTGGG
GGATTCCTTCTCCTGCTTCTTCTTCTTCTTGCCCTTCAACTTATCCACCAAAATCTGCAGCGGCTTGGATTCATCGTCAGATGCTT
GCTCATCCTCATCCTCACCCACATCTTCATCTTCATCATCAGTCCTCTTCCTCTTGCTCTTCTTAGAGGAAGGCATTGGTCTTGTC
ACTTTTTCAGAGACAGCCTCTGATGAAGACGAAGAACCCCTTTTCTTCTTCCCATTGGTTGCTTCGGAAATCTTATTGCACGACCT
CAGACGCGAGGCCGCTGCTACAATCTTCCCACCAATGTCACCCATGACACCATTTGTCCTAGCAGACTTCCTGTTAGGCGGTTCTG
GGATAACATCAGCGATCTCATCGTCAGATTTGTCCTCATCAGCAGCATTGTCATCATCATCATCATCTTCAATTAACTCCCACCTC
TCCTTGTCCATATCCAAGATCTCTTTCTCACCATCATCATAAAAAACCCGATGTTTCTTAGTGCGAGAGTTAAAGGAATCAACCAC
TCCATTGTAGAACTTTCGATCTATCGGCCACCAAACTCTAACCTTTGAACCCACCAAGTCTTCACCATTGCTAACCTTATCTTTCC
CAGAGACACTCGAAGGTTTAGTCTTGGCTGATGATGAGAGCTTCTTAGCACCAGCCATTTTTTTCTGACAATTGAGAGGAGGGAAT
CTAGGTCGGGGAGAGAGAGAGGGGGGGAGTTCGTTCTCTTACAGCGCAGTAAGAGGATATGATTGGGTGAATTGTAAGAATGAGAC
TGAAGAAGGAATCAATTTAAATTGAGATTTTTTAGGGTTCGAAAGGGTGTGACATCCATCCCCCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196656 cylicin-related protein [Arabidopsis thaliana] | 345 | 3e-030 |
| XP_002873488 hypothetical protein ARALYDRAFT_909052 [Arabidopsis lyrata subsp. lyrata] | 336 | 3e-029 |
| NP_178196 Tudor/PWWP/MBT superfamily protein [Arabidopsis thaliana] | 320 | 2e-027 |
| AAF14668 ESTs gb|Z34732, gb|R89948 and gb|Z33946 come from this gene [Arabidopsis thaliana] | 319 | 3e-027 |
| NP_001077860 Tudor/PWWP/MBT superfamily protein [Arabidopsis thaliana] | 312 | 2e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54F38 Histone H3.v1 | 173 | 1e-011 |
| Q55FI4 Nucleolar protein 58 | 172 | 2e-011 |
| Q555V7 VID27-like protein | 159 | 5e-010 |
| Q7M732 Retrotransposon-like protein 1 | 157 | 9e-010 |
| P15771 Nucleolin | 156 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LEU5 Putative uncharacterized protein At5g10950 | 345 | 2e-030 |
| B3H4B3 Uncharacterized protein At1g80810.1 | 320 | 2e-027 |
| Q9SAI0 F23A5.16 protein | 319 | 2e-027 |
| A8MRD9 Uncharacterized protein At1g80810.2 | 312 | 1e-026 |
| B9IL45 Predicted protein | 279 | 1e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10950.1 cylicin-related | 345 | 1e-032 |
| AT1G80810.1 binding | 320 | 9e-030 |
| AT1G80810.2 binding | 312 | 8e-029 |
| AT4G31880.1 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: binding (TAIR:AT1G15940.1); Has 114836 Blast hits to 56273 proteins in 1914 species: Archae - 187; Bacteria - 15478; Metazoa - 53116; Fungi - 16017; Plants - 4342; Viruses - 719; Other Eukaryotes - 24977 (source: NCBI BLink). | 260 | 9e-023 |
| AT1G15940.1 binding | 246 | 4e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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