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Information for unigene UN10341
| FASTA Sequence |
| Unigene ID: UN10341 | Length: 1713 |
| SNP | GGACCACTAGGGTTTCTCTTCAACCGCTCCTTCTCTTCTCATCTCTCCCTCTCATCTCTCGCAGAGGACGGCTACGAAAGATGCTG
GGAGGATTGCTGGGTTGGAAGTTCTTCGTATTATCAATGAGCCGACGGCTGCTTCTTTGGCTTATGGGTTTGAGAGGAAAAGCAAT
GAGACTATTCTTGTCTTTGATCTTGGTGGTGGTACCTTTGATGTCTCAGTGCTTGAGGTTGGTGATGGTGTGTTTGAAGTACTTTC
TACTTCTGGTGACACCCATTTGGGTGGTGATGATTTTGACAAGAGGGTTGTTGATTGGCTTACTTCAAACTTCAAGAAAGATGAGG
GTATTGATCTTCTGAAAGACAAACAAGCACTTCAAAGGTTGACAGAGGCAGCAGAAAAAGCTAAAATCGAGCTTTCATCTCTGACT
CAAACGAATATGAGCTTGCCATTTATCACGGCCACAGCTGATGGACCTAAACACATAGAAACCACCCTCACACGTGCCAAGTTCGA
GGAATTGTGCTCAGATTTACTCGACAGGTGTAAGACTCCCGTTGAGAATTCTCTGAGGGATGCGAAGCTCAGCTTTAAGGATATTG
ATGAAGTGATCCTTGTTGGTGGATCCACACGTATTCCTGCTGTTCAAGAAGTCGTCAGGAAGCTGACTGGGAAAGAACCCAATGTC
ACAGTAAACCCTGATGAGGTTGTAGCTCTAGGTGCTGCGGTTCAGGCTGGTGTTCTAGCTGGGGATGTGAGCGACATTGTCCTTCT
TGACGTGACACCCCTATCCATTGGTTTGGAAACACTTGGCGGTGTTATGACCAAGATTATTCCACGGAACTCAACTCTGCCTACTT
CTAAGTCAGAAGTCTTCTCCACTGCTGCTGATGGACAGACAAGTGTTGAGATTAATGTGTTGCAGGGTGAGAGGGAGTTTGTCCGG
GATAACAAGTCTCTTGGCAGCTTCCGTCTAGATGGCATCCCACCAGCACCACGTGGAGTTCCACAGATCGAAGTCAAATTTGACAT
CGATGCCAATGGTATTCTATCCGTCAGTGCTAGTGACAAAGGCACCGGAAAGAAACAAGACATCACCATTACTGGTGCCAGTACAT
TGCCCAAGGACGAGGTAGAGCAAATGGTCCAAGAAGCAGAAAGGTTTGCAAAGGACGACAAGGAGAAGAGAGACGCAATTGACACG
AAGAACCAGGCGGATTCAGTGGTGTACCAGACAGAGAAGCAACTCAAAGAACTCGGTGAGAAGATTCCAGGTGAAGTGAAAGAGAA
GGTGGAGGCCAAGCTACAAGAGCTGAAAGACAAGATTGCAAGTGGAACTACTCAAGAGATCAAGGACACGATGGCTGCTCTTAACC
AAGAAGTGATGCAGATTGGTCAGTCGATGTACAACCAGCCTGGAGCAGGAGCAGCAGGTGCAGGTCCTTCCCCTGGAGGCGAAGAT
GCTTCATCAGCTGATTCAACCGGGAAAGATGGTGATGATGTGATTGACGCTGACTTCACAGACAGCAGCAAATGATGAAAGAAATA
CGGTTTTGAATTCATATATCCGATGAAACACATGATTTTGTAGGCTTGATTGGGTTGAGAAACAACGCATGTGAACACGAAATGTT
TTTACAGAATGTGTTGTTACGTTATTCCTGCATGTTATTGCCTTCTTTTGGAACTATAAATGAGGATATTTTTCAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869727 cphsc70-1 [Arabidopsis lyrata subsp. lyrata] | 2345 | 6e-262 |
| NP_194159 chloroplast heat shock protein 70-1 [Arabidopsis thaliana] | 2333 | 2e-260 |
| XP_002864020 cphsc70-2 [Arabidopsis lyrata subsp. lyrata] | 2267 | 7e-253 |
| NP_199802 heat shock protein 70-2 [Arabidopsis thaliana] | 2259 | 6e-252 |
| AAF27639 heat shock protein 70 [Arabidopsis thaliana] | 2251 | 5e-251 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q02028 Stromal 70 kDa heat shock-related protein, chloroplastic | 2173 | 2e-243 |
| Q08080 Stromal 70 kDa heat shock-related protein, chloroplastic (Fragment) | 2081 | 1e-232 |
| Q8YW74 Chaperone protein dnaK2 | 1781 | 7e-198 |
| P50021 Chaperone protein dnaK2 | 1743 | 2e-193 |
| P22358 Chaperone protein dnaK2 | 1736 | 1e-192 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9STW6 Hsp 70-like protein | 2333 | 1e-260 |
| Q9LTX9 Heat shock protein 70 | 2259 | 4e-252 |
| Q9M637 Heat shock protein 70 | 2251 | 3e-251 |
| B9SKC7 Heat shock protein, putative | 2213 | 9e-247 |
| B9N0E2 Predicted protein | 2203 | 1e-245 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G24280.1 cpHsc70-1 (chloroplast heat shock protein 70-1); ATP binding | 2333 | 6e-263 |
| AT5G49910.1 CPHSC70-2EAT SHOCK PROTEIN 70-2 (CHLOROPLAST HEAT SHOCK PROTEIN 70-2); ATP binding / unfolded protein binding | 2259 | 2e-254 |
| AT5G09590.1 MTHSC70-2 (MITOCHONDRIAL HSP70 2); ATP binding | 1389 | 2e-153 |
| AT4G37910.1 mtHsc70-1 (mitochondrial heat shock protein 70-1); ATP binding | 1368 | 4e-151 |
| AT5G02490.1 heat shock cognate 70 kDa protein 2 (HSC70-2) (HSP70-2) | 1126 | 5e-123 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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