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Information for unigene UN10343

FASTA Sequence
Unigene ID: UN10343Length: 867 SSR 
CAACATAATTTCAACTGATATTAAAACCCATCCGCATAATGTAAACACATAACAAAAAAGTATATCATCACTGATCAAAAGGGACG
ATATGAAACTTGTAAAACAATTCAAGATTCGAAAACTTTTATCGCAGAGTTCTTAAACAAAGAGAAGTCACTGAAAGCTCAAACAA
TGGATGGATATAAAGCAGCCATGATGGTTTTATTGGTATGGCATGTAACGCATTGGCCTTCTGAACCTTGGAACTTTCCCATATCC
ATATGGAGAATACATATAGGGAGACATGAAAGGTCTGCGGAAGCCCATGTACGGGTTGAATCTTCTACCGCGGAACTGTTTCAATC
CAGGAACGTTTGTTCTCTTAGGCATCACCTTTATCTGACGACCATGTAACTCTGATTCGTTCAGTTGTAGCGCCTCTTGTATAGCT
TCAGCTTCCACAAACTCGACATAAGCGAACCCCTTTGGCTGCCCAAACTTGTCTGTCAGAATTGTCACCCGGTGGACTGTGCCGCA
TGATTGGAAGTGTTTCTGCACTTCTTCAGGTGTACAAGCGTAATCAACATTGCCAACAAAAACAGATCGAGCATCCACCTCCTCTT
TGCCTGCTTGATCTGCTGCTACAGTACCAGCATCTTGAGGTCCCATATCCTTCTCAACCTTGGCTTGCATCTCACGAAGAGCAGCA
GCTTCGTCCTCAATCTCTTTCAATCGCTTCTTCATCTCATCCAACTCCTTAGCGGCATCATCATCAGCGGCAGTCATGTCCATGTC
TCCATCCATCTCTCCGACGTCCGGAATCTCTCCGCCGTATACCTCGTGCTCCTCTTCCTCCATCGCCTCTCTCTCTCTCTCTCTCT
CTCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97957 poly(A)-binding protein II-like [Brassica rapa]10137e-108
NP_201329 RNA recognition motif-containing protein [Arabidopsis thaliana]10101e-107
XP_002866661 polyadenylate-binding protein family protein [Arabidopsis lyrata subsp. lyrata]10056e-107
XP_002531675 poly-A binding protein, putative [Ricinus communis]9133e-096
XP_002306300 predicted protein [Populus trichocarpa]9043e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q9DDY9 Polyadenylate-binding protein 2-A3897e-037
Q7ZXB8 Polyadenylate-binding protein 2-B3889e-037
Q6NVP7 Polyadenylate-binding protein 23824e-036
O14327 Polyadenylate-binding protein 23753e-035
Q28165 Polyadenylate-binding protein 23735e-035

TrEMBL top hits (Blast detail)Scoree value
A1YMZ8 Poly(A)-binding protein II-like10135e-108
Q9FJN9 Poly(A)-binding protein II-like10101e-107
B9T0A6 Poly-A binding protein, putative9132e-096
B9H4R7 Predicted protein9042e-095
B7FID7 Putative uncharacterized protein8998e-095

Arabidopsis top hits (Blast detail)Scoree value
AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein10115e-110
AT5G10350.1 polyadenylate-binding protein family protein / PABP family protein8852e-095
AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein8036e-086
AT5G51120.1 PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding6989e-074
AT3G55460.1 SCL30; RNA binding / nucleic acid binding / nucleotide binding1262e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  75%
 
121  13%
 
91  13%

Unigene MembersMember information