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Information for unigene UN10347
| FASTA Sequence |
| Unigene ID: UN10347 | Length: 1579 |
SSR | | AATGGATAAAGAAGTTCTCTCTGCAATGAACTGAAACAAAACTCCAGAGTGAAAACTGAGTACAGACCAAACAGTTCAACTGTTCA
ACTACAAGAAGTTTACTCAAAGGACCAAACACAAAACATATAGAGACTTGAAAGAAAAAACCAAAGCTACTAAATCACTGCTTCTC
AGCTTTGTAACTAGACCCACGGACATTATCACAAACCATAGTAATCTACACCAATTTCAAGAGCAGACAGATCAAATGAGGAGCGG
AGAGGAAGAGGTTTCATGTCTGAGTCCCGTTTTAAAGCTGCACTTCTCTGTCATGTATCCAGCTGAAAGGAATCTTGGGTCCTTTC
TTGGCTCTTGCTTGAGCTCTCTCATCCAACCTCCTGATTCTCGGAGTCAGCCCACATAAGTAGTCTTGTGCTTTGTTTCCTTCACC
CGAAAGCCCCTTTAAGTTCTCAATCTTCCACCTCCCAACCAAAAACTCAAGAATGTCCGCATAGTCTTTAGCAGTGTAAACACCGA
GCCTCTGAGCCACTGAAGAGAAGTTGTCAAAGAGGCTGTCATCACGCCCATCGTACATCAAGTGAGCAGGCATCGAGATTTTCTTT
CTCATCATGTCTGCAAACGCCATGACAGTACCATCAGGATCAATCTCAAAGAGCTTCTCAACTATCTTGGTGTAAGCGGTCTCGTG
ACGCTTCTCGTCTGCAGCTATTGTGCCACATATTTGGGCTAGTTTGAGGTCTCCATGCTCTTTAGCATGGCGTGCTGTGTTTCCGT
GAGAGACGAAGGTGGCTCTTTCTTGGAAAGAGGTGTAGGTGAAGCCAAGGTAAGGATTGTTCTCTGTCCTTGGATCCATTCCTGAA
CCAATCAAGTACTGAATGGTCTTTTCAATCTGCCTCATGTCAACACGACCAGACAAGTAAAGGTACTTATTGAGAAGATCACCATG
TCGGTTCTCTTCTGCAGTCCAAGCTCTAGTCCAAATAGCCCATGAAGTGGGGCTAGCACCAGTTTCATCTCTTACTCCATCCAAAG
TGTTCAACATGGTTTGATAGGTCGGAAGCGCTTCTTCCGTGATCATGTCTCCCACCAGAACAACAAAGTAATCATCAGGGAGCTCT
CTCGCCCTCTCTCTCAACTCTCTTACCTGATCTTCAAACCCGTCGGATGCAGGGTCGGGTAAGAAGTCCTGGGGCTGCCACGACTT
CTCCACGTCCTTGAGATGAGTTAGAAGGTTCTGCTCGGCCCAGCCTTCCATAGATTTGAAGATCTCGATCTTCTGGGGTGGCATGG
AGTGCAGGACTTGAAGGTGCACTTCCTTTGGTGGGGTGAATGGCTTCTTCAAAGTCTCAACCTCCTTGGAGGTGAGAGCGGGAGAA
GAAGAAGCGAGGCAGAGGAACTTGGGAGATCTGAAAGTAGAGATTGGCGGACGAGCCGAGGAAGGGAAGTTGTAAGGCTGAGATGC
CAAAGGGTTAAGCTTCAATGCCATAATATCTTTTCTGGATTCTTTCAGAGACAACCGAGCTCTCTCTCTCTCTCTCTCTCTCTAAG
GCTAATGCTTTCTCTCTCTCTCAGACTATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| P29108 RecName: Full=Acyl-[acyl-carrier-protein] desaturase, chloroplastic; AltName: Full=Stearoyl-ACP desaturase; Flags: Precursor | 2038 | 2e-226 |
| AAD40245 plastidic delta-9-stearoyl-acyl-acyl carrier protein desaturase [Brassica juncea] | 2002 | 3e-222 |
| BAJ34062 unnamed protein product [Thellungiella halophila] | 1994 | 3e-221 |
| CAA52786 Stearoyl-acyl carrier protein desaturase [Brassica napus] | 1992 | 5e-221 |
| XP_002880063 hypothetical protein ARALYDRAFT_903770 [Arabidopsis lyrata subsp. lyrata] | 1977 | 3e-219 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P29108 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 2038 | 9e-228 |
| Q01771 Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic | 1967 | 2e-219 |
| P22337 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1769 | 1e-196 |
| P32061 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1724 | 2e-191 |
| P22243 Acyl-[acyl-carrier-protein] desaturase, chloroplastic | 1686 | 6e-187 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XQR7 Acyl-[acyl-carrier-protein] desaturase | 2002 | 2e-222 |
| Q39355 Acyl-[acyl-carrier-protein] desaturase | 1992 | 3e-221 |
| O22832 Acyl-[acyl-carrier-protein] desaturase | 1970 | 1e-218 |
| Q6DUV7 Acyl-[acyl-carrier-protein] desaturase | 1970 | 1e-218 |
| Q94AE9 Acyl-[acyl-carrier-protein] desaturase | 1966 | 3e-218 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G43710.1 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1971 | 5e-221 |
| AT2G43710.2 SSI2; acyl-[acyl-carrier-protein] desaturase/ stearoyl-CoA 9-desaturase | 1966 | 2e-220 |
| AT3G02630.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1540 | 5e-171 |
| AT5G16240.1 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative | 1506 | 4e-167 |
| AT3G02610.1 acyl-[acyl-carrier-protein] desaturase/ oxidoreductase/ transition metal ion binding | 1376 | 5e-152 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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