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Information for unigene UN10363

FASTA Sequence
Unigene ID: UN10363Length: 1506 SSR 
GGGTGTAACACATGAAACTTTATTTACTTTACACAAACACAAGTGAAAGACATGATTTGTTTTTTTTGTTCATCTCACCCACACAA
ATATAGCCCCATCTCATATCTAATTTACACATCCTCTCTTGTAAAAAATACTAAAGAAAATAAACCCGAAAAGTGTATAAACTAGT
ACCATTTTCTTGAGACAATTACTAATAATATACGTAGGATGATGATATGTAAATATCTCTCTCTTTATGGATATGGTAAAAGGGAA
CTTTTAGTCTGTGTCTTCGTATTGTTGTTGTTTTCTTTTAAATCCCAATTCAAGGGTTTTGCTCATCAAAAATGTCCAAAAGAGAA
AGAACCTCAGGGACGGTGAGTTCGAGGCGGAACTTAGGGCCGTCGTAGTGGTGGAGAATGGGACGGAAGGAATCTTCTTCCAAAGG
CAAACAAACTTTCCTCGTGATGGCCCTGACCTGAGCAGGGAACCGAGATTCGCCAGGACATTTCTTGTCTTCGAAAGCGTTGAGCT
CAATGTTAGTTCCACCGAAGCTAGCGGCCTGGTAAACACCGTGGAGCTGGTGAGTGGAGTAGTTGTAGAGGAAGAGAGGAAGACCG
GGAGTGATGGCTCTGACCGAGTCCCTGTATCTCGGAGGCAAACCGAAAAGCTGGCGCTTCAGATTCTCCTCCATGGTGTCGTTGTT
GCACACGAAGATGTAACCACCGATGGTCTCGTTCCTCGGAAGAGCCTCTGCTGGAGGAAGAGTCTTAAACCTCTTCTCGTTGGTGA
TCTTGTCATCTTCCTTGTTGTTGTTGTTGTTATTCTTCTGATTCTTCCTGTTCTTCTTCCCTACTCCTTTCTGGGGGGTCTGATGA
TGATGATCTTGATCGATGAGCATCCCCTTGTTGTTCTTGAAATTGAAGCCATAGCTCTTGGGCTGGGAGGAGTAGATGCCCTTGTT
GAAATCGCCGTTGTTGACGTCCGAGTTGTTGAGTTTCCAGGGGTTGTCGTCGGTGTGGTTGAAATTGACGTTTGTGGATGTTGTTG
ATTTTGAGCCGATGGGTCCGAAACCGTTGGAGCTAGACTTCCAGGTGTTCCAGCTCGCAGCGTTGTTGTTGTTGTTGTTGTCGGAA
GAAGCCTTGTTGTTGTTGTGATATTCGATAGGGTTTTTGTTGGTGGAGGCGGCTGCGATGTCGAAGTTTCTGCGGTCGTCGGTGCG
TTTGTTGGTGGTGCTCCAGATGGAGTCGTTTAAGGAAAGATTGTGGGGCGTCTGGAGGACTCTCAATTGATCGCTGAACTGCCAAA
ACGTTTGCTGGTTATTGTTATTATCCATCTTCTTTTTTCTTCTTTCTTTTAAATAAGTGATTTTATGGTTTTTCTAGGATGATCTC
TCGATATTACAGATCGATTTGTGAATGAAATTGTTGAGATTTGGGAGGCTTGTTAAGTAGACAAGTAGATTTGGTGACCAAATAAG
TAACAAAAAAGTGTTTGGTGTGTTGAAAAGTTGTAATGTTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870594 hypothetical protein ARALYDRAFT_493778 [Arabidopsis lyrata subsp. lyrata]11977e-129
NP_568600 DCD (Development and Cell Death) domain protein [Arabidopsis thaliana]9729e-103
CAI44933 N-rich protein [Glycine max]9111e-095
BAB08438 unnamed protein product [Arabidopsis thaliana]9021e-094
ACU23341 unknown [Glycine max]8974e-094

Swiss-Prot top hits (Blast detail)Scoree value
P37707 B2 protein7564e-079
Q02817 Mucin-21892e-013
Q6XHA7 Probable serine/threonine-protein kinase roco91776e-012
Q54UW4 Bromodomain-containing protein DDB_G02807771741e-011
Q54KX0 GATA zinc finger domain-containing protein 141678e-011

TrEMBL top hits (Blast detail)Scoree value
Q8RXN8 Putative uncharacterized protein9726e-103
Q5JZR1 N-rich protein9117e-096
Q9FHX9 Genomic DNA, chromosome 5, P1 clone:MJC209028e-095
C6TKA1 Putative uncharacterized protein8973e-094
B9RYM8 N-rich protein, putative8249e-086

Arabidopsis top hits (Blast detail)Scoree value
AT5G42050.1 FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27090.1); Has 5084 Blast hits to 2870 proteins in 85 species: Archae - 0; Bacteria - 24; Metazoa - 270; Fungi - 58; Plants - 157; Viruses - 8; Other Eukaryotes - 4567 (source: NCBI BLink).12062e-132
AT3G27090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42050.1); Has 642 Blast hits to 564 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 12; Fungi - 0; Plants - 155; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).6892e-072
AT5G61910.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453 proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792; Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source: NCBI BLink).2402e-020
AT5G61910.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2453 proteins in 312 species: Archae - 1; Bacteria - 477; Metazoa - 1792; Fungi - 482; Plants - 477; Viruses - 8; Other Eukaryotes - 814 (source: NCBI BLink).2402e-020
AT5G61910.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Development and cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32910.1); Has 4051 Blast hits to 2448 proteins in 312 species: Archae - 1; Bacteria - 479; Metazoa - 1786; Fungi - 481; Plants - 479; Viruses - 8; Other Eukaryotes - 817 (source: NCBI BLink).2402e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  75%
 
102  25%

Unigene MembersMember information