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Information for unigene UN10392
| FASTA Sequence |
| Unigene ID: UN10392 | Length: 959 |
| SNP | AAATGGGTATGAGATTTGTGTTTTCATACTTGCGGAAGAAGATAAATCCTCAGAGCTAGCTTGAATATTGGTTTAAGTGCATTGAC
TTGGATGCAAATGGGATACTGACGCGAAATGAGATGCAATTCTTTTATGAGGAGCAGTTACATCGAATGGAGTGTATGGCGCAAGA
GGCTGTTCTTTTTGAGGATATATTATGTCAGCTAATTGATATGATCGGACCAGAGAATGAAAGCTATATAACCCTGAATGACCTGA
AGGGCTCCAAACTCTCTGGAAACGTCTTCAACATCCTTTTTAATCTTAATAAATTTATGGCATTTGAGACACGGGATCCATTCCTC
ATTCGTCAGGAGCGTGAGAACCCTACATTGACAGAGTGGGACCGTTTTGCACATAGAGAGTACATAAGGCTTTCGATGGAAGAAGA
TGTTGAAGATGCATCGAATGGAAGTGCTGAGGTTTGGGATGAGTCATTGGAGGCTCCCTTCTGAGTTCATCTAGGGTATTAGTGAA
CAGAAGAAATATCAAAATCATTGCGAAAAATCTTGGGAGCTATGTGAAGTAACGAAAGAGAAAGAAGAGTATATCCTCTGTCTGCT
TCAACATTCGTTGTTTGGTCATGGTCATCTTTGGGAGGTACCATCTTCCTCAGGGTTTACAATTGTGAATTCAGGTTTGAAACTGA
GAAGTTTCTGTTTTCATTTCAGTTTATAGCTATTGTTTTATGCGCAACGAGTTTCATTTATTTAATTTAAATAATCAGCGAGCAAT
GCTGATTTGCATGTTACACAATTGGCACTTGTTCATCCTGGTGTTTTGTATTTTCTGTACTTGTGTTAATCTCTTTATCTGTACTT
TGTAGCGAAGTTACTTTCTACACATCATATCTTTCTGTTGTTGTTTTCAGAATTGTTAATGTGACTTTAATCAATTGGTTGGTATT
ACTTTTTTTCTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002521983 calcium ion binding protein, putative [Ricinus communis] | 738 | 6e-076 |
| NP_198242 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 735 | 1e-075 |
| XP_002872330 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 735 | 1e-075 |
| CAN77418 hypothetical protein VITISV_023449 [Vitis vinifera] | 733 | 2e-075 |
| XP_002269177 PREDICTED: hypothetical protein [Vitis vinifera] | 733 | 2e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06190 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha | 316 | 2e-028 |
| Q9Y5P8 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta | 294 | 8e-026 |
| Q9Z176 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha | 264 | 2e-022 |
| Q6DJ05 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 160 | 3e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S7L4 Calcium ion binding protein, putative | 738 | 4e-076 |
| Q8VZQ4 Putative phosphatase 2A regulatory subunit B protein | 735 | 9e-076 |
| A5BZI9 Putative uncharacterized protein | 733 | 2e-075 |
| B9IPA8 Predicted protein | 732 | 2e-075 |
| Q56WJ0 Protein phosphatase 2A regulatory subunit B'-like protein | 732 | 2e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G28900.1 calcium-binding EF hand family protein | 736 | 4e-078 |
| AT5G28850.1 calcium-binding EF hand family protein | 733 | 9e-078 |
| AT5G28850.2 calcium-binding EF hand family protein | 733 | 9e-078 |
| AT1G54450.1 calcium-binding EF-hand family protein | 706 | 1e-074 |
| AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative | 660 | 3e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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