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Information for unigene UN10395

FASTA Sequence
Unigene ID: UN10395Length: 1572 SSR 
AGTTCCAATGATCCTCTTGCATTGAAATCACCGTTGTGAACCAAACAAAAAATGTACCAAACTGTTTAGACATGGTTTTACAACAG
GAAGACAGTTAAAATCATGTATTTTCTCCATTTCCTGTCTGAAACCAAAAACAAAAACTCAAAAGTAGAGAGAATATTATTCTTGC
AGCCACTAAATAGTAACAATGGCTACCTCCAAGCTGATTCATCAAAAAAGACTATCACATCATCATCATCATCATCATCATCATAA
TGTCAACTCCATCCCCATTGGAGAAGAATCCATTATAACATGCTAAAACCAGACAACAAAATTCAAATCTTCCATATGATCATTAG
ATCTCTCTCCATCAGAGGCTTCTTCTTATGTACATTAATTTTTGCATATCACTCCTCTGTTGATTTTTTCCAGTTTACTCTTCTTT
CCAGATTCGACCAGTTACCCTCAACTTGAGTTCTTGCCTATCACCTCCAGAAAAGTAAAGTGCAAGGTTTCTTGGGATGATGAGAC
CGTCTTGACTGTCTCGAACTTTCCTGTGACTGTCACGGATGCTTCTGGGGATCCCTTGCCATGTTAGTTTACGTCCATGAGCTCCT
ACTTCCAGGCTGTAACTGAACTTCTTCGCCTCGTTTTCATCTCTCATGAAACGAAAAAACGCCATGTACACTGGTGCCATCCCTAG
CTGGAAAGCCTCAAAGTGTAAACAGAACTGTCTCCCAAAACAGTTGAACACCGTAAGCATCCATGTAGCATTTTCGACTTCATGTG
GATTTGATTTTACATAACGGTGGTTGAAAGTGCACCCGTCATGCATATCGACTTTATGATCATCTTTAAGATGAACAACCAGCGTG
GAGATATCACCTGTAACCGAACACTCAGAGCCAGCATAAGGGCAAGCGTAAGGCCTAAACCTGCAATGCTGCTCGTGCTTAAGCTT
GCTGTAGTAAGGGAAAATATCGTGACATCCCAAGCTTTGGTACCGGCACGGAACTTCCAAGGACTCGGCGACTTTCTCGAGCGCCA
AGCATCTTATGTTGCCAAGCTCGTAGCGACACGTGGGGCACGTGTTCTGCACTCTCGCTTTGCAGTTGGAGCATAGCGTGTGACCG
TTTGGACACTGATGAATTGGAGGGTACATTAAGTTCGTACACACAGGACATTCAAGAAGCTCGTAGACACCATTGTTGGAATGCAT
CCCATGTTTTGCAATTCCTGCACTACTTGACTTTGTAGGTTTGTTGTTATTGCTATTGTTAACTTCCACTTTCGTAGTTTTGACCT
CATAATCCATTCTCGTCGAGTTAGATTCAAGGACTTCCTTCAAAGCACTGCCTCCAGGTGCCATGGTGAGTCACTGAGTCCTATGC
CCTTTTCTCCTCAGTGGTAGCTAGATGATTTACGCCTTTTCGATCTATTTTCTATACAGACTTGGAGATAGCGTGTTTTGTTTGAT
TCGGATCCAAATCAAAGACGAGAAGTCGACAGATTACTCAGAAAACGAAAGATAGACGGAGGAGGAGGAGGAGGACGATGGTTGTG
TCCTGTCTTATTAATATTCGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876454 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]16091e-176
NP_191363 E3 ubiquitin-protein ligase SINAT2 [Arabidopsis thaliana]15973e-175
NP_181729 ubiquitin-protein ligase SIAH1 [Arabidopsis thaliana]14763e-161
XP_002881813 seven in absentia family protein [Arabidopsis lyrata subsp. lyrata]14683e-160
XP_002308357 predicted protein [Populus trichocarpa]14226e-155

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2P4 E3 ubiquitin-protein ligase SINAT216132e-178
P93748 Putative E3 ubiquitin-protein ligase SINAT114761e-162
Q84JL3 E3 ubiquitin-protein ligase SINAT311955e-130
Q8S3N1 E3 ubiquitin-protein ligase SINAT511722e-127
Q9STN8 E3 ubiquitin-protein ligase SINAT411525e-125

TrEMBL top hits (Blast detail)Scoree value
B9HA10 Predicted protein14224e-155
B9T806 Ubiquitin ligase SINAT2, putative14126e-154
B9IIA7 Predicted protein13777e-150
Q9XGC3 SINA2p13543e-147
C6TM08 Putative uncharacterized protein13525e-147

Arabidopsis top hits (Blast detail)Scoree value
AT3G58040.1 SINAT2 (SEVEN IN ABSENTIA OF ARABIDOPSIS 2); protein binding / ubiquitin-protein ligase/ zinc ion binding16141e-179
AT2G41980.1 seven in absentia (SINA) family protein15092e-167
AT3G61790.1 seven in absentia (SINA) family protein11955e-131
AT4G27880.1 seven in absentia (SINA) family protein11524e-126
AT5G53360.1 seven in absentia (SINA) family protein9114e-098

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
112  50%

Unigene MembersMember information